Factsheet for VIT_11s0037g00070.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400028915	Potato	cytosol	93.95	93.95
Solyc07g005390.2.1	Tomato	cytosol, extracellular, nucleus, plastid	93.55	93.55
KRH03077	Soybean	cytosol, nucleus	93.55	93.36
KRH72280	Soybean	cytosol, nucleus	92.54	92.35
TraesCS2A01G190700.1	Wheat	cytosol	91.13	91.13
EES13911	Sorghum	cytosol	91.33	90.96
HORVU2Hr1G036110.7	Barley	cytosol	90.93	90.93
TraesCS2D01G197300.1	Wheat	golgi	90.73	90.73
TraesCS2B01G216400.1	Wheat	cytosol	90.73	90.73
GSMUA_Achr7P19330_001	Banana	cytosol	90.73	90.54
GSMUA_Achr6P01980_001	Banana	cytosol	89.92	89.92
Zm00001d050428_P003	Maize	cytosol	91.33	89.53
Bra007862.1-P	Field mustard	cytosol	89.52	89.52
Bra032110.1-P	Field mustard	cytosol	89.52	89.52
Os08t0440800-01	Rice	extracellular, plasma membrane	89.92	89.38
VIT_04s0008g05810.t01	Wine grape	cytosol	88.91	88.91
CDY34779	Canola	peroxisome	89.52	88.27
CDY20292	Canola	cytosol	89.11	87.87
CDY46134	Canola	peroxisome	55.65	86.25
CDY55249	Canola	cytosol	76.01	85.88
AT2G24270.2	Thale cress	cytosol	88.51	81.9
VIT_17s0000g07650.t01	Wine grape	peroxisome	30.44	30.02
VIT_14s0066g02410.t01	Wine grape	cytosol, peroxisome, plastid	29.23	29.12
VIT_01s0137g00080.t01	Wine grape	cytosol	22.78	28.54
VIT_14s0066g01550.t01	Wine grape	mitochondrion	30.04	27.85
VIT_19s0085g00860.t01	Wine grape	cytosol, mitochondrion, peroxisome	26.61	27.5
VIT_01s0026g00220.t01	Wine grape	mitochondrion	30.04	27.34
VIT_17s0000g07660.t01	Wine grape	cytosol	13.71	27.31
VIT_17s0000g08070.t01	Wine grape	mitochondrion	29.44	27.14
VIT_19s0085g00880.t01	Wine grape	plastid	28.23	26.42
VIT_19s0085g00870.t01	Wine grape	cytosol	25.2	25.36
VIT_03s0132g00200.t01	Wine grape	mitochondrion	26.01	23.93
VIT_11s0016g00900.t01	Wine grape	cytosol	23.79	23.23
VIT_01s0026g00210.t01	Wine grape	cytosol	27.22	23.0
VIT_05s0077g01060.t01	Wine grape	vacuole	27.22	22.77
VIT_09s0002g01010.t01	Wine grape	cytosol	19.35	21.24
VIT_03s0132g00230.t01	Wine grape	cytosol	19.35	16.61
VIT_00s0218g00070.t01	Wine grape	cytosol	25.6	9.2

Protein Annotations

EntrezGene:100260378	wikigene:100260378	MapMan:2.1.1.4.2	Gene3D:3.40.309.10	Gene3D:3.40.605.10	EMBL:AM459926
InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom
ProteinID:CAN70186	ProteinID:CAN70186.1	ProteinID:CBI36517	ProteinID:CBI36517.3	UniProt:D7U1A1	EMBL:FN596499
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620
GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163	EntrezGene:LOC100260378	wikigene:LOC100260378	PFAM:PF00171
ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR42991	PANTHER:PTHR42991:SF3	SUPFAM:SSF53720	TIGR:TC54003
UniParc:UPI00015C9C18	ArrayExpress:VIT_11s0037g00070	EnsemblPlantsGene:VIT_11s0037g00070	EnsemblPlants:VIT_11s0037g00070.t01	unigene:Vvi.3992	RefSeq:XP_002279374
RefSeq:XP_002279374.1	:	:	:	:	:

Description

No Description!

Coordinates

chr11:-:7715994..7721798

Molecular Weight (calculated)

53177.5 Da

IEP (calculated)

7.177

GRAVY (calculated)

0.037

Length

496 amino acids

Sequence
(BLAST)

001: MAGTGVFAEI IDGDVYKYYS EGEWRKAVSG KSVAIINPTT RKTQYRVQAC SQEEVNKAME IAKSAQKIWA KTPLWKRAEL LHKAAAILKE HKAPIAECLV
101: KEIAKPAKDA VTEVVRSGDL VSYTAEEGVR ILGEGKFLVS DSFPGNERSK YCLTSKIPLG VILAIPPFNY PVNLAVSKIA PALIAGNSIV LKPPTQGAVS
201: ALHMVHCFHL AGFPKGVISC VTGKGSEIGD FLTMHPGVNC ISFTGGDTGV AISKKAGMIP LQMELGGKDA CIVLEDADLD LVAANIVKGG FSYSGQRCTA
301: VKVVLAMESI ADTLVEKVNA KVAKLTVGPP EDDCDITPVV SESSANFIEG LVMDAKQKGA TFCQEYRREG NLIWPLLLDN VRPDMRIAWE EPFGPVLPVL
401: RINSVEEGIH HCNASNFGLQ GCVFTRDINK AILISDAMET GTVQINSAPA RGPDHFPFQG LKDSGIGSQG ITNSINMMTK IKSTVINLPS PSYTMG

Best Arabidopsis Sequence Match ( AT2G24270.2 )
(BLAST)

001: MLFHHSFHKN LSIITSSLSL SLLYNTQEAR HRGEILFQRS MAGTGLFAEI LDGEVYKYYA DGEWKTSSSG KSVAIMNPAT RKTQYKVQAC TQEEVNAVME
101: LAKSAQKSWA KTPLWKRAEL LHKAAAILKD NKAPMAESLV KEIAKPAKDS VTEVVRSGDL ISYCAEEGVR ILGEGKFLLS DSFPGNDRTK YCLTSKIPLG
201: VVLAIPPFNY PVNLAVSKIA PALIAGNSLV LKPPTQGAVS CLHMVHCFHL AGFPKGLISC ITGKGSEIGD FLTMHPAVNC ISFTGGDTGI SISKKAGMIP
301: LQMELGGKDA CIVLDDADLD LVASNIIKGG FSYSGQRCTA VKVVLVMESV ADELVEKVKA KVAKLTVGPP EENSDITAVV SESSANFIEG LVMDAKEKGA
401: TFCQEYKREG NLIWPLLLDN VRPDMRIAWE EPFGPVVPVL RINSVEEGIN HCNASNFGLQ GCVFTKDINK AILISDAMET GTVQINSAPA RGPDHFPFQG
501: LKDSGIGSQG VTNSINLMTK VKTTVINLPT PSYSMG

Arabidopsis Description

ALDH11A3aldehyde dehydrogenase 11A3 [Source:TAIR;Acc:AT2G24270]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.