Factsheet for VIT_14s0066g02410.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 2
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P16120_001	Banana	peroxisome	75.7	74.65
VIT_17s0000g07650.t01	Wine grape	peroxisome	75.1	74.35
VIT_17s0000g07660.t01	Wine grape	cytosol	36.55	73.09
Os04t0464200-01	Rice	peroxisome	72.09	71.09
KXG26485	Sorghum	peroxisome	72.09	70.95
TraesCS2D01G326900.1	Wheat	golgi, unclear	71.89	70.75
Zm00001d025626_P002	Maize	mitochondrion	71.89	70.75
Os08t0424500-01	Rice	plastid	71.08	70.38
HORVU2Hr1G080970.1	Barley	peroxisome	71.49	70.36
TraesCS2B01G346000.1	Wheat	mitochondrion	43.57	69.77
TraesCS6A01G371100.1	Wheat	golgi, nucleus, unclear	69.88	69.32
TraesCS6B01G408100.1	Wheat	mitochondrion	69.88	69.18
TraesCS6D01G355000.2	Wheat	golgi	69.68	68.99
Zm00001d032257_P001	Maize	extracellular	70.08	68.97
EES13852	Sorghum	peroxisome	69.88	68.91
Zm00001d050339_P001	Maize	extracellular	69.68	68.71
HORVU6Hr1G087460.1	Barley	plastid	70.08	66.35
TraesCS2A01G336000.1	Wheat	peroxisome	71.49	65.44
VIT_01s0137g00080.t01	Wine grape	cytosol	29.52	37.12
VIT_01s0026g00220.t01	Wine grape	mitochondrion	40.16	36.7
VIT_17s0000g08070.t01	Wine grape	mitochondrion	39.36	36.43
VIT_14s0066g01550.t01	Wine grape	mitochondrion	38.76	36.07
VIT_19s0085g00880.t01	Wine grape	plastid	38.15	35.85
VIT_19s0085g00860.t01	Wine grape	cytosol, mitochondrion, peroxisome	34.54	35.83
VIT_19s0085g00870.t01	Wine grape	cytosol	34.74	35.09
VIT_04s0008g05810.t01	Wine grape	cytosol	29.32	29.44
VIT_11s0037g00070.t01	Wine grape	cytosol	29.12	29.23
VIT_01s0026g00210.t01	Wine grape	cytosol	34.34	29.13
VIT_05s0077g01060.t01	Wine grape	vacuole	29.92	25.13
VIT_11s0016g00900.t01	Wine grape	cytosol	25.3	24.8
VIT_03s0132g00200.t01	Wine grape	mitochondrion	26.51	24.49
VIT_09s0002g01010.t01	Wine grape	cytosol	20.28	22.35
VIT_03s0132g00230.t01	Wine grape	cytosol	18.07	15.57
VIT_00s0218g00070.t01	Wine grape	cytosol	26.1	9.42

Protein Annotations

EntrezGene:100250859	wikigene:100250859	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:9.4.1.2	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	ProteinID:CCB58587
ProteinID:CCB58587.1	UniProt:F6HV69	EMBL:FN596252	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0008802	GO:GO:0009628	GO:GO:0009987	GO:GO:0016491	GO:GO:0016620
GO:GO:0055114	GO:GO:0071454	InterPro:IPR016162	InterPro:IPR016163	EntrezGene:LOC100250859	wikigene:LOC100250859
PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR43860	PANTHER:PTHR43860:SF3	SUPFAM:SSF53720
UniParc:UPI00015C99B0	ArrayExpress:VIT_14s0066g02410	EnsemblPlantsGene:VIT_14s0066g02410	EnsemblPlants:VIT_14s0066g02410.t01	unigene:Vvi.24381	RefSeq:XP_002281984
RefSeq:XP_002281984.1	:	:	:	:	:

Description

No Description!

Coordinates

chr14:-:28602291..28607458

Molecular Weight (calculated)

54261.6 Da

IEP (calculated)

5.145

GRAVY (calculated)

0.061

Length

498 amino acids

Sequence
(BLAST)

001: MAVPIPSRQL FIDGEWREPL LKKRIPIINP ATQEIIGDIP AATAEDVDIA VEAARRAFSK PDSWASTSGS FRAKFLRAIA DKILERKIEL AKLEVVDCGK
101: PIDEAISDMV SVAGCFKYYA ELAEALDAKQ RIPISIPMES FKTHVLKEPI GVVALITPWN YPLLMAAWKV APALAAGCTA ILKPSELASV TCLELAEVCR
201: DVALPPGVLN ILTGLGPEAG APLASHPHVD KIAFTGSTAT GIKIMTTAAQ TIKPISLELG GKSPILVFED VDLDNAIEWT LYGCFPNNGQ ICSATSRLLV
301: HENIAAKFVE KLIQWSKSIK ISDPLEEGCR LGAIVSEGQY EKILNFISTA KSEGATILYG GVRPQHLKKG FFIEPTIITD VSTSMQIWRE EVFGPVLCVK
401: TFATEEEATQ LANDTHYGLG AAVVSNDLER CERLTKVLQA GVVWVNCSQP CFDQAPWGGI KHSGIGRELG EWGLENYLTV KQVTQYTSDK QWGWYSPP

Best Arabidopsis Sequence Match ( AT1G74920.1 )
(BLAST)

001: MAIPMPTRQL FIDGEWREPI LKKRIPIVNP ATEEVIGDIP AATTEDVDVA VNAARRALSR NKGKDWAKAP GAVRAKYLRA IAAKVNERKT DLAKLEALDC
101: GKPLDEAVWD MDDVAGCFEF YADLAEGLDA KQKAPVSLPM ESFKSYVLKQ PLGVVGLITP WNYPLLMAVW KVAPSLAAGC TAILKPSELA SVTCLELADI
201: CREVGLPPGV LNVLTGFGSE AGAPLASHPG VDKIAFTGSF ATGSKVMTAA AQLVKPVSME LGGKSPLIVF DDVDLDKAAE WALFGCFWTN GQICSATSRL
301: LVHESIASEF IEKLVKWSKN IKISDPMEEG CRLGPVVSKG QYEKILKFIS TAKSEGATIL HGGSRPEHLE KGFFIEPTII TDVTTSMQIW REEVFGPVLC
401: VKTFASEDEA IELANDSHYG LGAAVISNDT ERCDRISEAF EAGIVWINCS QPCFTQAPWG GVKRSGFGRE LGEWGLDNYL SVKQVTLYTS NDPWGWYKSP
501: N

Arabidopsis Description

ALDH10A8ALDH10A8 [Source:UniProtKB/TrEMBL;Acc:A0A178W4Y2]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.