Factsheet for GSMUA_Achr6P01980_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P19330_001	Banana	cytosol	93.35	93.16
HORVU2Hr1G036110.7	Barley	cytosol	91.53	91.53
TraesCS2B01G216400.1	Wheat	cytosol	91.13	91.13
TraesCS2D01G197300.1	Wheat	golgi	90.93	90.93
TraesCS2A01G190700.1	Wheat	cytosol	90.93	90.93
EES13911	Sorghum	cytosol	91.13	90.76
Os08t0440800-01	Rice	extracellular, plasma membrane	91.13	90.58
KRH03077	Soybean	cytosol, nucleus	90.52	90.34
Solyc07g005390.2.1	Tomato	cytosol, extracellular, nucleus, plastid	90.32	90.32
KRH72280	Soybean	cytosol, nucleus	90.32	90.14
PGSC0003DMT400028915	Potato	cytosol	90.12	90.12
VIT_11s0037g00070.t01	Wine grape	cytosol	89.92	89.92
Zm00001d050428_P003	Maize	cytosol	90.93	89.13
Bra032110.1-P	Field mustard	cytosol	87.3	87.3
Bra007862.1-P	Field mustard	cytosol	86.9	86.9
VIT_04s0008g05810.t01	Wine grape	cytosol	86.09	86.09
CDY20292	Canola	cytosol	87.3	86.08
KRH05288	Soybean	cytosol	85.89	85.89
CDY34779	Canola	peroxisome	86.9	85.69
CDY46134	Canola	peroxisome	54.44	84.38
CDY55249	Canola	cytosol	73.99	83.6
AT2G24270.2	Thale cress	cytosol	86.69	80.22
GSMUA_Achr9P16120_001	Banana	peroxisome	30.24	29.7
GSMUA_Achr6P04810_001	Banana	cytosol	24.6	28.37
GSMUA_Achr5P26830_001	Banana	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	20.36	28.29
GSMUA_Achr5P24920_001	Banana	cytosol	27.82	27.38
GSMUA_Achr5P05290_001	Banana	mitochondrion	29.64	27.12
GSMUA_Achr3P06170_001	Banana	mitochondrion	28.83	26.88
GSMUA_Achr8P10590_001	Banana	endoplasmic reticulum	27.82	23.19
GSMUA_Achr11P...	Banana	endoplasmic reticulum	27.42	22.9
GSMUA_Achr4P22360_001	Banana	mitochondrion	24.6	22.68
GSMUA_Achr8P23610_001	Banana	cytosol, peroxisome, plastid	22.58	21.75
GSMUA_Achr3P26460_001	Banana	cytosol	29.03	18.39

Protein Annotations

MapMan:2.1.1.4.2	Gene3D:3.40.309.10	Gene3D:3.40.605.10	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS
InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr6G01980_001	EnsemblPlants:GSMUA_Achr6P01980_001
EnsemblPlants:GSMUA_Achr6T01980_001	InterPro:IPR016162	InterPro:IPR016163	UniProt:M0T3E6	PFAM:PF00171	ScanProsite:PS00070
ScanProsite:PS00687	PANTHER:PTHR42991	PANTHER:PTHR42991:SF3	SUPFAM:SSF53720	UniParc:UPI000296F57D	SEG:seg

Description

NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr6G01980_001]

Coordinates

chr6:-:1274793..1280153

Molecular Weight (calculated)

53171.6 Da

IEP (calculated)

7.436

GRAVY (calculated)

0.039

Length

496 amino acids

Sequence
(BLAST)

001: MAGTGVFAEI IDGEVYKYYA DGEWKKSASG KSVSIINPTT RTPQYKVQAC TQEEVNKVMD AAKAAQKLWA RTPLWKRAEF LHKAAAILKE HKNPIAECLV
101: KEIAKPAKDA VTEVVRSGDL ISYTAEDGVR ILGEGKLLVS DSFPGNERSK YCLSSKIPLG VVLAIPPFNY PVNLAVSKIA PALIAGNALV LKPPTQGAVA
201: ALHMIHCFHL AGFPKGLISC VTGKGSEIGD FLTMHPGVNC ISFTGGDTGI AISKKAGMIP LQMELGGKDA CIVLEDADLD LVTANIVKGG YSYSGQRCTA
301: VKVVLIMESV ADAVVEKVKA KMANLTIGPP EENCDITPVV SESSANFIQG LVMDAKQKGA TFCQEYRREG NLIWPLLLDH VRPDMRIAWE EPFGPVLPVI
401: RISSVEEGIH HCNASNFGLQ GCVFTKDINK AIMISDAMET GTVQINSAPA RGPDHFPFQG LKESGIGSQG ITNSINMMTK IKSTVINLPS PSYTIG

Best Arabidopsis Sequence Match ( AT2G24270.2 )
(BLAST)

001: MLFHHSFHKN LSIITSSLSL SLLYNTQEAR HRGEILFQRS MAGTGLFAEI LDGEVYKYYA DGEWKTSSSG KSVAIMNPAT RKTQYKVQAC TQEEVNAVME
101: LAKSAQKSWA KTPLWKRAEL LHKAAAILKD NKAPMAESLV KEIAKPAKDS VTEVVRSGDL ISYCAEEGVR ILGEGKFLLS DSFPGNDRTK YCLTSKIPLG
201: VVLAIPPFNY PVNLAVSKIA PALIAGNSLV LKPPTQGAVS CLHMVHCFHL AGFPKGLISC ITGKGSEIGD FLTMHPAVNC ISFTGGDTGI SISKKAGMIP
301: LQMELGGKDA CIVLDDADLD LVASNIIKGG FSYSGQRCTA VKVVLVMESV ADELVEKVKA KVAKLTVGPP EENSDITAVV SESSANFIEG LVMDAKEKGA
401: TFCQEYKREG NLIWPLLLDN VRPDMRIAWE EPFGPVVPVL RINSVEEGIN HCNASNFGLQ GCVFTKDINK AILISDAMET GTVQINSAPA RGPDHFPFQG
501: LKDSGIGSQG VTNSINLMTK VKTTVINLPT PSYSMG

Arabidopsis Description

ALDH11A3aldehyde dehydrogenase 11A3 [Source:TAIR;Acc:AT2G24270]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.