Factsheet for GSMUA_Achr4P22360_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0132g00200.t01	Wine grape	mitochondrion	81.78	81.63
HORVU2Hr1G107520.1	Barley	cytosol, peroxisome	48.14	81.19
KRH42067	Soybean	mitochondrion	81.23	80.78
KRH10621	Soybean	cytosol	77.51	80.66
KRH49851	Soybean	mitochondrion	80.48	80.63
Os07t0188800-01	Rice	mitochondrion	79.74	80.34
Zm00001d019054_P001	Maize	mitochondrion	79.37	79.52
EER95994	Sorghum	mitochondrion	79.74	79.44
TraesCS2B01G501200.1	Wheat	golgi, mitochondrion, unclear	78.62	79.21
TraesCS2A01G477900.1	Wheat	mitochondrion	78.44	79.17
TraesCS2D01G477100.2	Wheat	golgi, mitochondrion	78.07	78.65
CDX81452	Canola	mitochondrion	76.39	77.99
PGSC0003DMT400027691	Potato	mitochondrion	77.7	77.84
Bra037214.1-P	Field mustard	mitochondrion	76.21	77.8
CDY37216	Canola	mitochondrion	76.02	77.61
HORVU2Hr1G107550.1	Barley	plasma membrane	78.44	72.76
KRH21731	Soybean	cytosol	40.52	69.87
AT2G14170.1	Thale cress	mitochondrion	77.32	68.53
VIT_03s0132g00230.t01	Wine grape	cytosol	55.95	52.08
KRH45519	Soybean	nucleus	68.03	36.49
VIT_00s0218g00070.t01	Wine grape	cytosol	76.77	29.93
GSMUA_Achr6P04810_001	Banana	cytosol	23.42	29.3
GSMUA_Achr5P26830_001	Banana	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	19.33	29.13
GSMUA_Achr5P24920_001	Banana	cytosol	26.77	28.57
GSMUA_Achr5P05290_001	Banana	mitochondrion	27.51	27.31
GSMUA_Achr3P06170_001	Banana	mitochondrion	26.95	27.26
GSMUA_Achr9P16120_001	Banana	peroxisome	25.28	26.93
GSMUA_Achr7P19330_001	Banana	cytosol	23.05	24.95
GSMUA_Achr6P01980_001	Banana	cytosol	22.68	24.6
GSMUA_Achr8P23610_001	Banana	cytosol, peroxisome, plastid	23.42	24.47
GSMUA_Achr3P26460_001	Banana	cytosol	27.51	18.9
GSMUA_Achr11P...	Banana	endoplasmic reticulum	19.7	17.85
GSMUA_Achr8P10590_001	Banana	endoplasmic reticulum	19.14	17.31

Protein Annotations

KEGG:00280+1.2.1.27	KEGG:00640+1.2.1.27	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.2.7.6.3	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004491	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr4G22360_001	EnsemblPlants:GSMUA_Achr4P22360_001	EnsemblPlants:GSMUA_Achr4T22360_001
InterPro:IPR016162	InterPro:IPR016163	UniProt:M0SR49	InterPro:MeMal-semiAld_DH	PFAM:PF00171	ScanProsite:PS00070
PANTHER:PTHR43866	PANTHER:PTHR43866:SF5	SUPFAM:SSF53720	TIGRFAMs:TIGR01722	UniParc:UPI000294975B	:

Description

Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr4G22360_001]

Coordinates

chr4:-:22676385..22686078

Molecular Weight (calculated)

57770.5 Da

IEP (calculated)

7.737

GRAVY (calculated)

-0.057

Length

538 amino acids

Sequence
(BLAST)

001: MLRSSLHRVA GFRAWRCSAT ALRVLRLSTA AEASSIHGTH PPRVRNLIGG EFVESQSEDW IDVINPATQE VVSRVPLTTN EEFKAAVGAA KSAFPQWRNV
101: PLTTRQRIMF KLQELIRRDM DKLALNITTE QGKTLKDAQG DVFRGLEVVE HACGMATLQM GEYASNVSNG IDTYSIREPL GVCAGICPFN FPAMIPLWMF
201: PVAVTCGNTY VLKPSEKDPG ASMMLAELAK EAGLPDGVLN IVHGTNNIVN NICDDEDIKA ISFVGSNTAG MHIYARAAAK GKRVQSNMGA KNHAIIMPDA
301: SPDATLNALV AAGFGAAGQR CMALSTAVFV GGSKSWEDEL IKRAKMLKVN AGTEPGTDLG PVISRQAKDR ICKLIQSGVE SGARVALDGR DIVVRGLENG
401: NFVGPTILAD TTSDMECYKE EIFGPVLLLM KADSLDEAIH IVNSNKYGNG ASIFTTSGVA ARKFQTEIEA GQVGINVPIP VPLPFFSFTG SKASFAGDLN
501: FYGKAGVQFY TQLKTVTQQW KDAPGQGISL AMPTSHKS

Best Arabidopsis Sequence Match ( AT2G14170.1 )
(BLAST)

001: MVRVKQKNLE SYRSNGTYPP TWRNPTTSFA PDQHRVSIHS SLKSKTKRRR LYKEADDNTK LRSSSSTTTT TTTMLLRISG NNLRPLRPQF LALRSSWLST
101: SPEQSTQPQM PPRVPNLIGG SFVESQSSSF IDVINPATQE VVSKVPLTTN EEFKAAVSAA KQAFPLWRNT PITTRQRVML KFQELIRKNM DKLAMNITTE
201: QGKTLKDSHG DIFRGLEVVE HACGMATLQM GEYLPNVSNG VDTYSIREPL GVCAGICPFN FPAMIPLWMF PVAVTCGNTF ILKPSEKDPG ASVILAELAM
301: EAGLPDGVLN IVHGTNDTVN AICDDEDIRA VSFVGSNTAG MHIYARAAAK GKRIQSNMGA KNHGLVLPDA NIDATLNALL AAGFGAAGQR CMALSTVVFV
401: GDAKSWEDKL VERAKALKVT CGSEPDADLG PVISKQAKER ICRLIQSGVD DGAKLLLDGR DIVVPGYEKG NFIGPTILSG VTPDMECYKE EIFGPVLVCM
501: QANSFDEAIS IINKNKYGNG AAIFTSSGAA ARKFQMDIEA GQIGINVPIP VPLPFFSFTG NKASFAGDLN FYGKAGVDFF TQIKTVTQQW KDIPTSVSLA
601: MPTSQKQ

Arabidopsis Description

ALDH6B2Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WM29]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.