Factsheet for TraesCS2B01G501200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, unclear

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G477100.2	Wheat	golgi, mitochondrion	99.06	99.06
TraesCS2A01G477900.1	Wheat	mitochondrion	98.88	99.06
HORVU2Hr1G107520.1	Barley	cytosol, peroxisome	57.49	96.24
Os07t0188800-01	Rice	mitochondrion	92.7	92.7
EER95994	Sorghum	mitochondrion	92.13	91.11
Zm00001d019054_P001	Maize	mitochondrion	90.82	90.32
HORVU2Hr1G107550.1	Barley	plasma membrane	97.0	89.31
GSMUA_Achr4P22360_001	Banana	mitochondrion	79.21	78.62
VIT_03s0132g00200.t01	Wine grape	mitochondrion	77.34	76.62
KRH42067	Soybean	mitochondrion	76.59	75.6
KRH49851	Soybean	mitochondrion	75.66	75.23
KRH10621	Soybean	cytosol	72.28	74.66
CDX81452	Canola	mitochondrion	73.41	74.38
Bra037214.1-P	Field mustard	mitochondrion	73.22	74.19
CDY37216	Canola	mitochondrion	73.03	74.0
PGSC0003DMT400027691	Potato	mitochondrion	74.16	73.74
KRH21731	Soybean	cytosol	37.83	64.74
AT2G14170.1	Thale cress	mitochondrion	73.03	64.25
VIT_03s0132g00230.t01	Wine grape	cytosol	52.81	48.79
KRH45519	Soybean	nucleus	62.55	33.3
TraesCS1B01G321900.1	Wheat	peroxisome	26.03	28.08
TraesCS7B01G259100.1	Wheat	peroxisome	26.97	28.07
VIT_00s0218g00070.t01	Wine grape	cytosol	71.54	27.68
TraesCS3B01G452100.1	Wheat	golgi	25.84	27.6
TraesCS7B01G259200.1	Wheat	peroxisome	26.03	27.1
TraesCS2B01G346000.1	Wheat	mitochondrion	15.73	27.01
TraesCS7B01G116800.1	Wheat	mitochondrion	27.9	26.99
TraesCS6B01G321400.1	Wheat	mitochondrion	21.54	26.81
TraesCS6B01G183600.3	Wheat	mitochondrion	26.22	26.62
TraesCS6B01G408100.1	Wheat	mitochondrion	24.16	25.65
TraesCS2B01G216400.1	Wheat	cytosol	23.22	25.0
TraesCS5B01G210100.1	Wheat	peroxisome	22.66	23.77
TraesCS2B01G111400.2	Wheat	vacuole	22.28	18.39

Protein Annotations

KEGG:00280+1.2.1.27	KEGG:00640+1.2.1.27	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.2.7.6.3	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004491	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163	InterPro:MeMal-semiAld_DH
PFAM:PF00171	ScanProsite:PS00070	PANTHER:PTHR43866	PANTHER:PTHR43866:SF5	SUPFAM:SSF53720	TIGRFAMs:TIGR01722
EnsemblPlantsGene:TraesCS2B01G501200	EnsemblPlants:TraesCS2B01G501200.1	TIGR:cd07085	SEG:seg	:	:

Description

No Description!

Coordinates

chr2B:-:696356252..696362765

Molecular Weight (calculated)

57169.6 Da

IEP (calculated)

5.964

GRAVY (calculated)

0.001

Length

534 amino acids

Sequence
(BLAST)

001: MLRAVLLRSA SGLRRSPMAA PLSTAAASWL AEGTSPSPPR VRLLIGGDFV ESRATEHVDV TNPATQEVVS RIPLTTADEF SAAVDAARTA FPGWRNTPVT
101: ARQRIMFKYQ ELIRANMDKL AENITTEQGK TLKDAWGDVF RGLEVVEHAC GMGSLQMGEY VSNVSHGIDT FSIREPLGVC AGICPFNFPA MIPLWMFPIA
201: VTCGNTFVLK PSEKDPGAAM MLAELAMEAG LPKGVLNIVH GTHDVVNNIC DDEAIKAVSF VGSNTAGMHI YSRASASGKR VQCNMGAKNH AIILPDADRD
301: ATLNALIAAG FGAAGQRCMA LSTAVFVGGS EPWEDELVKR ASSLVVNTGT ANDADLGPVI SRQAKDRICK LVQSGADSGA RLVLDGREIV VPQFEDGNFI
401: GPTVLADVKS DMECYQEEIF GPVLLLMKAE SLDDAIQIVN RNKYGNGASI FTTSGVSARK FQTDIEAGQV GINVPIPVPL PFFSFTGSKA SFAGDLNFYG
501: KAGVQFFTQI KTITQQWKES SPQRVSLSMP TSQK

Best Arabidopsis Sequence Match ( AT2G14170.1 )
(BLAST)

001: MVRVKQKNLE SYRSNGTYPP TWRNPTTSFA PDQHRVSIHS SLKSKTKRRR LYKEADDNTK LRSSSSTTTT TTTMLLRISG NNLRPLRPQF LALRSSWLST
101: SPEQSTQPQM PPRVPNLIGG SFVESQSSSF IDVINPATQE VVSKVPLTTN EEFKAAVSAA KQAFPLWRNT PITTRQRVML KFQELIRKNM DKLAMNITTE
201: QGKTLKDSHG DIFRGLEVVE HACGMATLQM GEYLPNVSNG VDTYSIREPL GVCAGICPFN FPAMIPLWMF PVAVTCGNTF ILKPSEKDPG ASVILAELAM
301: EAGLPDGVLN IVHGTNDTVN AICDDEDIRA VSFVGSNTAG MHIYARAAAK GKRIQSNMGA KNHGLVLPDA NIDATLNALL AAGFGAAGQR CMALSTVVFV
401: GDAKSWEDKL VERAKALKVT CGSEPDADLG PVISKQAKER ICRLIQSGVD DGAKLLLDGR DIVVPGYEKG NFIGPTILSG VTPDMECYKE EIFGPVLVCM
501: QANSFDEAIS IINKNKYGNG AAIFTSSGAA ARKFQMDIEA GQIGINVPIP VPLPFFSFTG NKASFAGDLN FYGKAGVDFF TQIKTVTQQW KDIPTSVSLA
601: MPTSQKQ

Arabidopsis Description

ALDH6B2Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WM29]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.