CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019054_P001	Maize	mitochondrion	96.3	96.83
HORVU2Hr1G107520.1	Barley	cytosol, peroxisome	55.0	93.1
Os07t0188800-01	Rice	mitochondrion	91.67	92.7
TraesCS2A01G477900.1	Wheat	mitochondrion	91.11	92.31
TraesCS2B01G501200.1	Wheat	golgi, mitochondrion, unclear	91.11	92.13
TraesCS2D01G477100.2	Wheat	golgi, mitochondrion	90.56	91.57
HORVU2Hr1G107550.1	Barley	plasma membrane	91.3	85.0
GSMUA_Achr4P22360_001	Banana	mitochondrion	79.44	79.74
VIT_03s0132g00200.t01	Wine grape	mitochondrion	77.04	77.18
CDX81452	Canola	mitochondrion	74.44	76.28
Bra037214.1-P	Field mustard	mitochondrion	74.26	76.09
CDY37216	Canola	mitochondrion	74.07	75.9
KRH42067	Soybean	mitochondrion	75.74	75.6
KRH49851	Soybean	mitochondrion	75.0	75.42
KRH10621	Soybean	cytosol	72.04	75.24
PGSC0003DMT400027691	Potato	mitochondrion	74.63	75.05
AT2G14170.1	Thale cress	mitochondrion	74.26	66.06
KRH21731	Soybean	cytosol	37.78	65.38
VIT_03s0132g00230.t01	Wine grape	cytosol	52.96	49.48
KRH45519	Soybean	nucleus	63.15	34.0
VIT_00s0218g00070.t01	Wine grape	cytosol	71.67	28.04
KXG30827	Sorghum	mitochondrion, plastid	28.15	27.59
EES00989	Sorghum	cytosol	25.74	27.58
KXG32803	Sorghum	cytosol	25.0	26.95
KXG20268	Sorghum	cytosol	25.56	26.49
KXG19772	Sorghum	mitochondrion	27.04	26.26
KXG29578	Sorghum	mitochondrion	25.37	26.0
EES13852	Sorghum	peroxisome	24.26	25.94
EES13911	Sorghum	cytosol	22.96	24.9
KXG26485	Sorghum	peroxisome	23.15	24.7
EER98972	Sorghum	cytosol, peroxisome, plasma membrane	22.59	23.97
EER99950	Sorghum	endoplasmic reticulum	21.11	19.22

Protein Annotations

KEGG:00280+1.2.1.27	KEGG:00640+1.2.1.27	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.2.7.6.3	EntrezGene:8075050
InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	UniProt:C5XBV0
EnsemblPlants:EER95994	ProteinID:EER95994	ProteinID:EER95994.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004491
GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163	InterPro:MeMal-semiAld_DH	PFAM:PF00171
ScanProsite:PS00070	PANTHER:PTHR43866	PANTHER:PTHR43866:SF5	MetaCyc:PWY-5642	MetaCyc:PWY-6373	EnsemblPlantsGene:SORBI_3002G062500
SUPFAM:SSF53720	unigene:Sbi.14860	TIGRFAMs:TIGR01722	UniParc:UPI0001A82F28	RefSeq:XP_002459473.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:6035846..6043359

Molecular Weight (calculated)

57843.5 Da

IEP (calculated)

6.094

GRAVY (calculated)

0.013

Length

540 amino acids

Sequence
(BLAST)

001: MLRAALFRSA PGLRRSPAMA AAAAPFSTAA AAAAWLSNGP ASTPPRVRLL IGGEFVESRA DEHVDVTNPA TQEVVSRIPL TTADEFRAAV DAARTAFPGW
101: RNTPVTTRQR VMFKFQELIR ANMDKLAENI TTEQGKTLKD AWGDVFRGLE VVEHACGMGT LQMGEYVSNV SNGIDTFSIR EPLGVCAGIC PFNFPAMIPL
201: WMFPIAVTCG NTFVLKPSEK DPGAAMMLAE LAMEAGLPKG VLNIVHGTND VVNNICDDED IKAVSFVGSN TAGMHIYSRA SAAGKRVQCN MGAKNHAIIL
301: PDADRDATLN ALIAAGFGAA GQRCMALSTA VFVGGSESWE DELVNRASGL IVNSGMVNDA DLGPVISRQA KDRICKLVQS GVDSGARILL DGRKIVVPQY
401: EDGNFVGPTI LADVKSDMEC YKEEIFGPVL LLMKAESLDD AIQIINRNKY GNGASIFTTS GVYARKFQTD IEAGQVGINV PIPVPLPFFS FTGSKASFAG
501: DLNFYGKAGV QFFTQIKTIT QQWKESPAQR VSLSMPTSQK

Best Arabidopsis Sequence Match ( AT2G14170.1 )
(BLAST)

001: MVRVKQKNLE SYRSNGTYPP TWRNPTTSFA PDQHRVSIHS SLKSKTKRRR LYKEADDNTK LRSSSSTTTT TTTMLLRISG NNLRPLRPQF LALRSSWLST
101: SPEQSTQPQM PPRVPNLIGG SFVESQSSSF IDVINPATQE VVSKVPLTTN EEFKAAVSAA KQAFPLWRNT PITTRQRVML KFQELIRKNM DKLAMNITTE
201: QGKTLKDSHG DIFRGLEVVE HACGMATLQM GEYLPNVSNG VDTYSIREPL GVCAGICPFN FPAMIPLWMF PVAVTCGNTF ILKPSEKDPG ASVILAELAM
301: EAGLPDGVLN IVHGTNDTVN AICDDEDIRA VSFVGSNTAG MHIYARAAAK GKRIQSNMGA KNHGLVLPDA NIDATLNALL AAGFGAAGQR CMALSTVVFV
401: GDAKSWEDKL VERAKALKVT CGSEPDADLG PVISKQAKER ICRLIQSGVD DGAKLLLDGR DIVVPGYEKG NFIGPTILSG VTPDMECYKE EIFGPVLVCM
501: QANSFDEAIS IINKNKYGNG AAIFTSSGAA ARKFQMDIEA GQIGINVPIP VPLPFFSFTG NKASFAGDLN FYGKAGVDFF TQIKTVTQQW KDIPTSVSLA
601: MPTSQKQ

Arabidopsis Description

ALDH6B2Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WM29]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.