Factsheet for Bra035119.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87380	Canola	mitochondrion	99.81	95.83
AT1G79440.1	Thale cress	mitochondrion	93.21	93.56
GSMUA_Achr5P26830_001	Banana	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	52.08	77.31
PGSC0003DMT400044163	Potato	plastid	71.51	73.88
KRH13776	Soybean	mitochondrion	74.72	73.74
KXG29578	Sorghum	mitochondrion	72.83	73.24
KRH43670	Soybean	mitochondrion	74.15	73.18
Solyc09g090700.1.1	Tomato	plastid	71.89	72.99
Zm00001d053776_P015	Maize	mitochondrion	72.08	72.49
TraesCS6A01G155500.1	Wheat	mitochondrion	71.51	72.05
TraesCS6B01G183600.3	Wheat	mitochondrion	71.13	71.67
TraesCS6D01G145400.4	Wheat	mitochondrion	71.89	70.43
Os02t0173900-01	Rice	mitochondrion	40.0	68.39
VIT_19s0085g00860.t01	Wine grape	cytosol, mitochondrion, peroxisome	61.51	67.92
HORVU6Hr1G031480.15	Barley	mitochondrion	67.74	64.68
Bra001952.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	35.47	37.52
Bra003781.1-P	Field mustard	plastid	35.47	37.52
Bra019522.1-P	Field mustard	mitochondrion	37.55	37.27
Bra019528.1-P	Field mustard	mitochondrion	35.28	37.18
Bra018090.1-P	Field mustard	mitochondrion	37.74	37.11
Bra016330.1-P	Field mustard	mitochondrion	36.04	35.57
Bra024619.1-P	Field mustard	mitochondrion	35.66	35.26
Bra030906.1-P	Field mustard	cytosol, peroxisome, plastid	27.74	29.17
Bra037214.1-P	Field mustard	mitochondrion	28.68	28.84
Bra007862.1-P	Field mustard	cytosol	25.09	26.81
Bra032110.1-P	Field mustard	cytosol	25.09	26.81
Bra037964.1-P	Field mustard	cytosol	11.51	26.52
Bra029596.1-P	Field mustard	vacuole	26.42	23.61

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.2.2.2.1	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS
InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	EnsemblPlantsGene:Bra035119	EnsemblPlants:Bra035119.1	EnsemblPlants:Bra035119.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004777	GO:GO:0005488	GO:GO:0005507
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759
GO:GO:0006540	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009013	GO:GO:0009056
GO:GO:0009408	GO:GO:0009416	GO:GO:0009450	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009628	GO:GO:0009987	GO:GO:0016491	GO:GO:0016620	GO:GO:0051287	GO:GO:0055114
GO:GO:0072593	InterPro:IPR016162	InterPro:IPR016163	UniProt:M4F222	PFAM:PF00171	ScanProsite:PS00070
ScanProsite:PS00687	PANTHER:PTHR43353	PANTHER:PTHR43353:SF5	SUPFAM:SSF53720	InterPro:Succ_semiAld_DH	TIGRFAMs:TIGR01780
UniParc:UPI0002541D56	SEG:seg	:	:	:	:

Description

AT1G79440 (E=4e-271) ALDH5F1, SSADH1, SSADH | ALDH5F1; 3-chloroallyl aldehyde dehydrogenase/ NAD or NADH binding / succinate-semialdehyde dehydrogenase

Coordinates

chrA07:-:22249535..22254052

Molecular Weight (calculated)

56674.5 Da

IEP (calculated)

7.689

GRAVY (calculated)

0.024

Length

530 amino acids

Sequence
(BLAST)

001: MVLGAAARVA IVGCRRLVCS SSHASPLLVS SQCRQMSMDA QSVSEKLRSS GLLRTQGLIG GKWIDSYDKT TIKVNNPATG EIVADVACMG VKETNDAIAS
101: SYEAFQSWSR RTAGERSRVL RRWFDLLVAH KEELGQLITL EQGKPLKEAI GEVAYGASFI EYYAEEAKRV YGDIIPPNAS DRRLLVLKQP VGVVGAITPW
201: NFPLAMITRK VGPALASGCT VVVKPSELTP LTALAAAELA LQAGVPPGAL NVVMGNAPEI GDALLASPQV RKITFTGSTA VGKKLMAAAA PTVKKVSLEL
301: GGNAPSIIFD DADLDVAVKG TLAAKFRNSG QTCVCANRVL VQDGIYDKFA EAFSEAVQKL EVGDGFKEGT TQGPLINDAA IQKVESFVQD AVSKGAKILL
401: GGKKHSLGMT FYEPTVIRDV TSNMIMSKEE IFGPVAPLIR FKTEEDAIRI ANDTIAGLAA YIFTNSVQRS WRVSEALEYG LVGVNEGIIS TEVAPFGGVK
501: QSGLGREGSK YGMDEYHEIK YICMGDMNRQ

Best Arabidopsis Sequence Match ( AT1G79440.1 )
(BLAST)

001: MVIGAAARVA IGGCRKLISS HTSLLLVSSQ CRQMSMDAQS VSEKLRSSGL LRTQGLIGGK WLDSYDNKTI KVNNPATGEI IADVACMGTK ETNDAIASSY
101: EAFTSWSRLT AGERSKVLRR WYDLLIAHKE ELGQLITLEQ GKPLKEAIGE VAYGASFIEY YAEEAKRVYG DIIPPNLSDR RLLVLKQPVG VVGAITPWNF
201: PLAMITRKVG PALASGCTVV VKPSELTPLT ALAAAELALQ AGVPPGALNV VMGNAPEIGD ALLTSPQVRK ITFTGSTAVG KKLMAAAAPT VKKVSLELGG
301: NAPSIVFDDA DLDVAVKGTL AAKFRNSGQT CVCANRVLVQ DGIYDKFAEA FSEAVQKLEV GDGFRDGTTQ GPLINDAAVQ KVETFVQDAV SKGAKIIIGG
401: KRHSLGMTFY EPTVIRDVSD NMIMSKEEIF GPVAPLIRFK TEEDAIRIAN DTIAGLAAYI FTNSVQRSWR VFEALEYGLV GVNEGLISTE VAPFGGVKQS
501: GLGREGSKYG MDEYLEIKYV CLGDMNRH

Arabidopsis Description

ALDH5F1Succinate-semialdehyde dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SAK4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.