Factsheet for GSMUA_Achr6P06530_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P01630_001	Banana	cytosol	96.24	96.24
GSMUA_Achr8P17490_001	Banana	cytosol, mitochondrion	88.0	95.9
Zm00001d004646_P001	Maize	cytosol	49.65	90.56
HORVU7Hr1G023890.1	Barley	cytosol	12.94	84.62
KXG28344	Sorghum	cytosol	94.12	82.47
Zm00001d049239_P001	Maize	plasma membrane, plastid	94.12	82.47
KRH42750	Soybean	endoplasmic reticulum, nucleus	92.94	81.44
VIT_17s0000g09840.t01	Wine grape	cytosol	92.47	81.03
TraesCS2B01G517500.1	Wheat	cytosol, extracellular, golgi	92.24	80.82
TraesCS2D01G489900.1	Wheat	cytosol	92.24	80.82
TraesCS2A01G489600.2	Wheat	cytosol, golgi, unclear	92.0	80.62
TraesCS2A01G493600.2	Wheat	cytosol, golgi, unclear	92.0	80.62
TraesCS2D01G493500.1	Wheat	cytosol	92.0	80.62
TraesCS2B01G521600.2	Wheat	cytosol, golgi, plastid	91.76	80.41
AT3G23810.1	Thale cress	cytosol	91.06	79.79
Bra014984.1-P	Field mustard	cytosol	91.06	79.79
Bra001921.1-P	Field mustard	cytosol	91.06	79.79
CDX77483	Canola	cytosol	86.35	79.78
CDY47309	Canola	cytosol	91.06	79.63
CDY01177	Canola	cytosol, extracellular	90.82	79.59
Bra032750.1-P	Field mustard	cytosol	90.82	79.59
Bra028345.1-P	Field mustard	cytosol	90.82	79.59
Solyc09g092390.2.1	Tomato	extracellular	90.82	79.59
Solyc09g092380.2.1	Tomato	extracellular	90.82	79.59
CDY50423	Canola	cytosol	90.59	79.38
KRH31567	Soybean	cytosol, mitochondrion	90.59	79.38
AT4G13940.1	Thale cress	cytosol	90.35	79.18
PGSC0003DMT400011624	Potato	cytosol	90.12	78.97
KRH58847	Soybean	nucleus	93.18	78.73
Solyc12g098500.1.1	Tomato	cytosol, extracellular, nucleus, plastid, unclear	89.65	78.56
HORVU2Hr1G109370.1	Barley	cytosol, plastid	92.47	77.82
CDX85127	Canola	cytosol	86.12	77.05
HORVU2Hr1G110120.3	Barley	cytosol, plastid	91.53	76.42
Bra014002.1-P	Field mustard	cytosol	85.88	76.36
CDY53211	Canola	cytosol	85.41	76.26
CDY58805	Canola	cytosol	84.71	75.79
Os11t0455500-01	Rice	extracellular, plasma membrane	91.76	75.73
CDY67319	Canola	cytosol	31.76	73.37
CDY50106	Canola	cytosol	87.06	72.83
CDY18090	Canola	cytosol	87.06	72.83
Solyc05g032820.1.1	Tomato	plastid	37.41	71.62
HORVU1Hr1G064320.1	Barley	plastid	9.41	33.61

Protein Annotations

KEGG:00270+3.3.1.1	Gene3D:3.40.50.1480	Gene3D:3.40.50.720	MapMan:50.3.3	InterPro:Adenosylhomocysteinase-like	InterPro:Ado_hCys_hydrolase_NAD-bd
GO:GO:0003674	GO:GO:0003824	GO:GO:0004013	GO:GO:0006730	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr6G06530_001	EnsemblPlants:GSMUA_Achr6P06530_001	EnsemblPlants:GSMUA_Achr6T06530_001	UniProt:M0T4Q1
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00670	PFAM:PF05221	PIRSF:PIRSF001109	ScanProsite:PS00739	PANTHER:PTHR23420
PANTHER:PTHR23420:SF12	InterPro:S-Ado-L-homoCys_hydrolase_CS	SMART:SM00996	SMART:SM00997	SUPFAM:SSF51735	SUPFAM:SSF52283
UniParc:UPI00029579C6	SEG:seg	:	:	:	:

Description

Adenosylhomocysteinase [Source:GMGC_GENE;Acc:GSMUA_Achr6G06530_001]

Coordinates

chr6:+:4406680..4409928

Molecular Weight (calculated)

46547.4 Da

IEP (calculated)

6.668

GRAVY (calculated)

-0.097

Length

425 amino acids

Sequence
(BLAST)

001: MALVVEKTST GREYKVKDLS QADFGRLEIE LAEVEMPGLM SCRAEFGPSQ PFAGARITGS LHMTIQTADH AAAAIARDSA AVFAWKGETL AEYWWCTERC
101: LDWGPTGGPD LIVDDGGDAT LLIHEGVDPK KYRRMKDRLV GVSEETTTGV KRLYQMQASG ALLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI
201: AGKVAVVCGY GDVGKGCAAA LKQAGARVIV TEIDPICALQ ALMEGLPVLT LEDVVSEADI FVTTTGNKDI IMVDHMKKMK NNAIVCNIGH FDNEIDMQGL
301: ETYPGIKRIT IKPQTDRWVF PETSTGIIVL AEGRLMNLGC ATGHPSFVMS CSFTNQVIAQ LELWKERKTG KYEKKVYVLP KHLDEKVAAL HLGKLGAKLT
401: KLTPSQAEYI SVPVEGPYKP VHYRY

Best Arabidopsis Sequence Match ( AT3G23810.1 )
(BLAST)

001: MALLVEKTSS GREYKVKDMS QADFGRLEIE LAEVEMPGLV SCVTEFGPSQ PLKGARITGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLQEYWWC TERALDWGPG GGPDLIVDDG GDATLLIHEG VKAEEIFAKN GTFPDPTSTD NPEFQIVLSI IKDGLQVDPK KYHKMKERLV
201: GVSEETTTGV KRLYQMQETG ALLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVICGY GDVGKGCAAA MKTAGARVIV TEIDPICALQ
301: ALMEGLQVLT LEDVVSEADI FCTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMLGL ETYPGVKRIT IKPQTDRWVF PDTNSGIIVL AEGRLMNLGC
401: ATGHPSFVMS CSFTNQVIAQ LELWNEKSSG KYEKKVYVLP KHLDEKVAAL HLGKLGARLT KLTKDQSDYV SIPVEGPYKP VHYRY

Arabidopsis Description

SAHH2Adenosylhomocysteinase [Source:UniProtKB/TrEMBL;Acc:A0A178VEP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.