CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18090	Canola	cytosol	100.0	100.0
CDX77483	Canola	cytosol	88.98	98.26
Bra028345.1-P	Field mustard	cytosol	90.94	95.26
CDY53211	Canola	cytosol	89.17	95.17
AT3G23810.1	Thale cress	cytosol	90.16	94.43
CDY47309	Canola	cytosol	87.99	91.98
CDY01177	Canola	cytosol, extracellular	87.6	91.75
CDY50423	Canola	cytosol	87.2	91.34
CDX85127	Canola	cytosol	85.04	90.95
VIT_05s0029g00330.t01	Wine grape	cytosol	83.86	87.84
KRH31567	Soybean	cytosol, mitochondrion	83.86	87.84
CDY58805	Canola	cytosol	82.09	87.79
PGSC0003DMT400011624	Potato	cytosol	83.66	87.63
Solyc09g092380.2.1	Tomato	extracellular	83.27	87.22
Solyc09g092390.2.1	Tomato	extracellular	83.27	87.22
Solyc12g098500.1.1	Tomato	cytosol, extracellular, nucleus, plastid, unclear	83.27	87.22
GSMUA_Achr6P06530_001	Banana	cytosol	72.83	87.06
GSMUA_Achr9P01630_001	Banana	cytosol	72.83	87.06
GSMUA_Achr8P17490_001	Banana	cytosol, mitochondrion	65.35	85.13
CDY67319	Canola	cytosol	29.13	80.43
Solyc05g032820.1.1	Tomato	plastid	29.72	68.02
CDY40156	Canola	cytosol	10.04	56.67

Protein Annotations

KEGG:00270+3.3.1.1	Gene3D:3.40.50.1480	Gene3D:3.40.50.720	MapMan:7.3.2	GO:A0A078FUB8	UniProt:A0A078FUB8
InterPro:Adenosylhomocysteinase	InterPro:Adenosylhomocysteinase-like	InterPro:Ado_hCys_hydrolase_NAD-bd	ProteinID:CDY18090.1	EnsemblPlants:CDY50106	ProteinID:CDY50106
ProteinID:CDY50106.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004013	GO:GO:0005488
GO:GO:0006139	GO:GO:0006730	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0019510	GO:GO:0051287	EnsemblPlantsGene:GSBRNA2T00095912001	HAMAP:MF_00563	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00670	PFAM:PF05221	PIRSF:PIRSF001109	ScanProsite:PS00738	ScanProsite:PS00739	PANTHER:PTHR23420
PANTHER:PTHR23420:SF11	MetaCyc:PWY-5041	InterPro:S-Ado-L-homoCys_hydrolase_CS	SMART:SM00996	SMART:SM00997	SUPFAM:SSF51735
SUPFAM:SSF52283	TIGRFAMs:TIGR00936	UniPathway:UPA00314	UniParc:UPI0004EE2C31	SEG:seg	:

Description

BnaC01g43540DAdenosylhomocysteinase [Source:UniProtKB/TrEMBL;Acc:A0A078FUB8]

Coordinates

chrLK032881:+:57657..59929

Molecular Weight (calculated)

55789.6 Da

IEP (calculated)

5.670

GRAVY (calculated)

0.005

Length

508 amino acids

Sequence
(BLAST)

001: MALLVEKTSS GREYKVKDMS QADFGRLEIE LAEVEMPGLV SCVTEFGPSQ PLKGARITGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLQEYWWC TERALDWGPG GGPDLIVDDG GDATLLIHEG VKAEEIFAKT GQLPDPTSTD NPEFQIVLSI IKDGLQVDPK KYHKMKERLV
201: GVSEETTTGV KRLYQMQETG ALLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVICGY GDVGKGCAAA MKTAGARVIV TEIDPICALQ
301: ALMEGLQVLT LEDVVSEADI FCTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMQGL ETYPGVKRIT IKPQTDRWVF PDTKSGIIVL AEGRLMNLGC
401: ATGHPSFVMS CSFTNQKVYV LPKHLDEKVA ALHLGKLGAR LTKLTKDQSD YVSIPVEGPY KPLVRVWSGW GNMRYWSSYE VDQILVSIRG CCSLVLRGCF
501: MFCFVFPF

Best Arabidopsis Sequence Match ( AT3G23810.1 )
(BLAST)

001: MALLVEKTSS GREYKVKDMS QADFGRLEIE LAEVEMPGLV SCVTEFGPSQ PLKGARITGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLQEYWWC TERALDWGPG GGPDLIVDDG GDATLLIHEG VKAEEIFAKN GTFPDPTSTD NPEFQIVLSI IKDGLQVDPK KYHKMKERLV
201: GVSEETTTGV KRLYQMQETG ALLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVICGY GDVGKGCAAA MKTAGARVIV TEIDPICALQ
301: ALMEGLQVLT LEDVVSEADI FCTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMLGL ETYPGVKRIT IKPQTDRWVF PDTNSGIIVL AEGRLMNLGC
401: ATGHPSFVMS CSFTNQVIAQ LELWNEKSSG KYEKKVYVLP KHLDEKVAAL HLGKLGARLT KLTKDQSDYV SIPVEGPYKP VHYRY

Arabidopsis Description

SAHH2Adenosylhomocysteinase [Source:UniProtKB/TrEMBL;Acc:A0A178VEP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.