Factsheet for VIT_05s0029g00330.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42750	Soybean	endoplasmic reticulum, nucleus	94.02	94.02
VIT_17s0000g09840.t01	Wine grape	cytosol	93.2	93.2
PGSC0003DMT400011624	Potato	cytosol	93.2	93.2
Solyc12g098500.1.1	Tomato	cytosol, extracellular, nucleus, plastid, unclear	92.78	92.78
Solyc09g092390.2.1	Tomato	extracellular	92.58	92.58
KXG28344	Sorghum	cytosol	92.37	92.37
KRH31567	Soybean	cytosol, mitochondrion	92.37	92.37
AT4G13940.1	Thale cress	cytosol	92.16	92.16
Zm00001d049239_P001	Maize	plasma membrane, plastid	92.16	92.16
Solyc09g092380.2.1	Tomato	extracellular	92.16	92.16
Bra001921.1-P	Field mustard	cytosol	92.16	92.16
AT3G23810.1	Thale cress	cytosol	91.96	91.96
TraesCS2B01G521600.2	Wheat	cytosol, golgi, plastid	91.75	91.75
Bra032750.1-P	Field mustard	cytosol	91.55	91.55
CDX77483	Canola	cytosol	86.8	91.52
Zm00001d004646_P001	Maize	cytosol	43.92	91.42
Bra028345.1-P	Field mustard	cytosol	91.34	91.34
CDY01177	Canola	cytosol, extracellular	91.34	91.34
CDY47309	Canola	cytosol	91.34	91.15
TraesCS2A01G493600.2	Wheat	cytosol, golgi, unclear	91.13	91.13
Bra014984.1-P	Field mustard	cytosol	91.13	91.13
TraesCS2D01G493500.1	Wheat	cytosol	91.13	91.13
CDY50423	Canola	cytosol	91.13	91.13
TraesCS2B01G517500.1	Wheat	cytosol, extracellular, golgi	90.93	90.93
TraesCS2D01G489900.1	Wheat	cytosol	90.72	90.72
TraesCS2A01G489600.2	Wheat	cytosol, golgi, unclear	90.52	90.52
KRH58847	Soybean	nucleus	93.81	90.46
CDX85127	Canola	cytosol	87.01	88.84
CDY53211	Canola	cytosol	86.8	88.45
HORVU2Hr1G109370.1	Barley	cytosol, plastid	91.13	87.52
Bra014002.1-P	Field mustard	cytosol	86.19	87.45
HORVU2Hr1G110120.3	Barley	cytosol, plastid	91.55	87.23
CDY58805	Canola	cytosol	84.95	86.74
Os11t0455500-01	Rice	extracellular, plasma membrane	90.72	85.44
CDY50106	Canola	cytosol	87.84	83.86
CDY18090	Canola	cytosol	87.84	83.86
HORVU7Hr1G023890.1	Barley	cytosol	11.13	83.08
CDY67319	Canola	cytosol	28.45	75.0
Solyc05g032820.1.1	Tomato	plastid	34.23	74.77
HORVU1Hr1G064320.1	Barley	plastid	8.87	36.13

Protein Annotations

KEGG:00270+3.3.1.1	EntrezGene:100253872	wikigene:100253872	Gene3D:3.40.50.1480	Gene3D:3.40.50.720	MapMan:7.3.2
UniProt:A5C5K3	EMBL:AM483121	InterPro:Adenosylhomocysteinase	InterPro:Adenosylhomocysteinase-like	InterPro:Ado_hCys_hydrolase_NAD-bd	ProteinID:CAN64242
ProteinID:CAN64242.1	ProteinID:CCB44315	ProteinID:CCB44315.1	EMBL:FN594958	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004013	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006730	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019510	GO:GO:0033353	GO:GO:0051287
EntrezGene:LOC100253872	wikigene:LOC100253872	HAMAP:MF_00563	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00670	PFAM:PF05221
PIRSF:PIRSF001109	ScanProsite:PS00738	ScanProsite:PS00739	PANTHER:PTHR23420	PANTHER:PTHR23420:SF12	InterPro:S-Ado-L-homoCys_hydrolase_CS
SMART:SM00996	SMART:SM00997	SUPFAM:SSF51735	SUPFAM:SSF52283	TIGR:TC63405	TIGRFAMs:TIGR00936
UniParc:UPI0001522819	ArrayExpress:VIT_05s0029g00330	EnsemblPlantsGene:VIT_05s0029g00330	EnsemblPlants:VIT_05s0029g00330.t01	unigene:Vvi.24377	RefSeq:XP_002266154
RefSeq:XP_002266154.1	SEG:seg	:	:	:	:

Description

Adenosylhomocysteinase [Source:UniProtKB/TrEMBL;Acc:A5C5K3]

Coordinates

chr5:+:14827765..14829698

Molecular Weight (calculated)

53184.2 Da

IEP (calculated)

6.297

GRAVY (calculated)

-0.159

Length

485 amino acids

Sequence
(BLAST)

001: MSLLVEKTSS GREYKVKDMS QADFGRLEIE LAEVEMPGLM SCRTEFGPQQ PFKGAKITGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLQEYWWC TERALDWGPG GGPDLIVDDG GDATLLIHEG VKAEEEYAKS GKLPDPSSTD NAEFQIVLTI IRDGLKTDPK RYHKMKGRLV
201: GVSEETTTGV KRLYQMQANG TLLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVVCGY GDVGKGCAAA LKQAGARVIV TEIDPICALQ
301: ALMEGIPVQT IEDVVSEADI FVTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMLGL ETYPGVKRIT IKPQTDRWVF PDTNSGIIVL AEGRLMNLGC
401: ATGHPSFVMS CSFTNQVIAQ LELWKEKASG KYEKKVYVLP KHLDEKVAAL HLGKLGAKLT KLSKDQADYI SVPIEGPYKP PHYRY

Best Arabidopsis Sequence Match ( AT4G13940.1 )
(BLAST)

001: MALLVEKTSS GREYKVKDMS QADFGRLELE LAEVEMPGLM ACRTEFGPSQ PFKGARITGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLQEYWWC TERALDWGPG GGPDLIVDDG GDATLLIHEG VKAEEIFEKT GQVPDPTSTD NPEFQIVLSI IKEGLQVDPK KYHKMKERLV
201: GVSEETTTGV KRLYQMQQNG TLLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVICGY GDVGKGCAAA MKTAGARVIV TEIDPICALQ
301: ALMEGLQVLT LEDVVSEADI FVTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMLGL ETYPGVKRIT IKPQTDRWVF PETKAGIIVL AEGRLMNLGC
401: ATGHPSFVMS CSFTNQVIAQ LELWNEKASG KYEKKVYVLP KHLDEKVALL HLGKLGARLT KLSKDQSDYV SIPIEGPYKP PHYRY

Arabidopsis Description

SAHH1Adenosylhomocysteinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O23255]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.