Factsheet for Zm00001d049239_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568
plastid: 22065420
plastid: 23198870
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG28344	Sorghum	cytosol	98.97	98.97
GSMUA_Achr9P01630_001	Banana	cytosol	84.33	96.24
GSMUA_Achr8P17490_001	Banana	cytosol, mitochondrion	76.49	95.13
Zm00001d004646_P001	Maize	cytosol	45.57	94.85
TraesCS2B01G521600.2	Wheat	cytosol, golgi, plastid	94.43	94.43
GSMUA_Achr6P06530_001	Banana	cytosol	82.47	94.12
TraesCS2A01G493600.2	Wheat	cytosol, golgi, unclear	93.81	93.81
TraesCS2D01G493500.1	Wheat	cytosol	93.81	93.81
TraesCS2B01G517500.1	Wheat	cytosol, extracellular, golgi	93.81	93.81
TraesCS2D01G489900.1	Wheat	cytosol	93.4	93.4
TraesCS2A01G489600.2	Wheat	cytosol, golgi, unclear	93.2	93.2
VIT_05s0029g00330.t01	Wine grape	cytosol	92.16	92.16
Bra032750.1-P	Field mustard	cytosol	92.16	92.16
Solyc09g092390.2.1	Tomato	extracellular	91.34	91.34
PGSC0003DMT400011624	Potato	cytosol	91.34	91.34
Bra001921.1-P	Field mustard	cytosol	91.34	91.34
Bra014984.1-P	Field mustard	cytosol	91.13	91.13
AT3G23810.1	Thale cress	cytosol	91.13	91.13
Solyc12g098500.1.1	Tomato	cytosol, extracellular, nucleus, plastid, unclear	90.93	90.93
AT4G13940.1	Thale cress	cytosol	90.93	90.93
Solyc09g092380.2.1	Tomato	extracellular	90.72	90.72
Bra028345.1-P	Field mustard	cytosol	90.52	90.52
VIT_17s0000g09840.t01	Wine grape	cytosol	90.52	90.52
HORVU2Hr1G109370.1	Barley	cytosol, plastid	93.81	90.1
HORVU2Hr1G110120.3	Barley	cytosol, plastid	94.23	89.78
Os11t0455500-01	Rice	extracellular, plasma membrane	94.85	89.32
Bra014002.1-P	Field mustard	cytosol	86.39	87.66
Solyc05g032820.1.1	Tomato	plastid	33.81	73.87
CDY40156	Canola	cytosol	10.52	56.67
KRG89762	Soybean	plastid	21.86	45.3

Protein Annotations

KEGG:00270+3.3.1.1	EntrezGene:100282150	Gene3D:3.40.50.1480	Gene3D:3.40.50.720	MapMan:7.3.2	ProteinID:AQK49910.1
InterPro:Adenosylhomocysteinase	InterPro:Adenosylhomocysteinase-like	InterPro:Ado_hCys_hydrolase_NAD-bd	EMBL:BT067833	UniProt:C0PHR4	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004013	GO:GO:0005488	GO:GO:0006139	GO:GO:0006730
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019510
GO:GO:0051287	HAMAP:MF_00563	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00670	PFAM:PF05221	PIRSF:PIRSF001109
ScanProsite:PS00738	ScanProsite:PS00739	PANTHER:PTHR23420	PANTHER:PTHR23420:SF12	InterPro:S-Ado-L-homoCys_hydrolase_CS	SMART:SM00996
SMART:SM00997	SUPFAM:SSF51735	SUPFAM:SSF52283	TIGRFAMs:TIGR00936	UniParc:UPI000160BB51	EnsemblPlantsGene:Zm00001d049239
EnsemblPlants:Zm00001d049239_P001	EnsemblPlants:Zm00001d049239_T001	SEG:seg	:	:	:

Description

adenosyl homocysteine hydrolase1Adenosylhomocysteinase

Coordinates

chr4:+:22371774..22374938

Molecular Weight (calculated)

53237.3 Da

IEP (calculated)

5.696

GRAVY (calculated)

-0.136

Length

485 amino acids

Sequence
(BLAST)

001: MALSVEKTSS GREYKVKDLS QADFGRLEIE LAEVEMPGLM ACRAEFGPSK PFAGARISGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLEEYWWC TERCLDWGEA GGPDLIVDDG GDATLLIHEG VKAEEDYEKT GKIPDPESTD NAEFKIVLTI IRDGLKADPK KYRKMKERLV
201: GVSEETTTGV KRLYQMQETG ALLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVVCGY GDVGKGCAAA LKQAGARVIV TEIDPICALQ
301: ALMEGLQVLP LEDVVSEADI FVTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMLGL ETYPGVKRIT IKPQTDRWVF PETNTGIIVL AEGRLMNLGC
401: ATGHPSFVMS CSFTNQVIAQ LELWKEKSSG KYEKKVYVLP KHLDEKVAAL HLGKLGAKLT KLTKSQADYI SVPIEGPYKP AHYRY

Best Arabidopsis Sequence Match ( AT4G13940.1 )
(BLAST)

001: MALLVEKTSS GREYKVKDMS QADFGRLELE LAEVEMPGLM ACRTEFGPSQ PFKGARITGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLQEYWWC TERALDWGPG GGPDLIVDDG GDATLLIHEG VKAEEIFEKT GQVPDPTSTD NPEFQIVLSI IKEGLQVDPK KYHKMKERLV
201: GVSEETTTGV KRLYQMQQNG TLLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVICGY GDVGKGCAAA MKTAGARVIV TEIDPICALQ
301: ALMEGLQVLT LEDVVSEADI FVTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMLGL ETYPGVKRIT IKPQTDRWVF PETKAGIIVL AEGRLMNLGC
401: ATGHPSFVMS CSFTNQVIAQ LELWNEKASG KYEKKVYVLP KHLDEKVALL HLGKLGARLT KLSKDQSDYV SIPIEGPYKP PHYRY

Arabidopsis Description

SAHH1Adenosylhomocysteinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O23255]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.