Factsheet for Bra014002.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 2
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58805	Canola	cytosol	98.54	99.16
Bra032750.1-P	Field mustard	cytosol	93.93	92.58
Bra001921.1-P	Field mustard	cytosol	92.47	91.13
AT4G13940.1	Thale cress	cytosol	92.47	91.13
Bra014984.1-P	Field mustard	cytosol	91.84	90.52
Bra028345.1-P	Field mustard	cytosol	91.84	90.52
HORVU7Hr1G023890.1	Barley	cytosol	12.13	89.23
Solyc09g092390.2.1	Tomato	extracellular	88.49	87.22
Solyc09g092380.2.1	Tomato	extracellular	88.49	87.22
TraesCS2B01G521600.2	Wheat	cytosol, golgi, plastid	88.28	87.01
PGSC0003DMT400011624	Potato	cytosol	88.28	87.01
TraesCS2D01G493500.1	Wheat	cytosol	88.08	86.8
TraesCS2A01G493600.2	Wheat	cytosol, golgi, unclear	88.08	86.8
Solyc12g098500.1.1	Tomato	cytosol, extracellular, nucleus, plastid, unclear	87.87	86.6
Zm00001d049239_P001	Maize	plasma membrane, plastid	87.66	86.39
KXG28344	Sorghum	cytosol	87.66	86.39
KRH31567	Soybean	cytosol, mitochondrion	87.66	86.39
GSMUA_Achr9P01630_001	Banana	cytosol	76.78	86.35
TraesCS2A01G489600.2	Wheat	cytosol, golgi, unclear	87.45	86.19
TraesCS2B01G517500.1	Wheat	cytosol, extracellular, golgi	87.45	86.19
VIT_05s0029g00330.t01	Wine grape	cytosol	87.45	86.19
TraesCS2D01G489900.1	Wheat	cytosol	87.24	85.98
GSMUA_Achr6P06530_001	Banana	cytosol	76.36	85.88
GSMUA_Achr8P17490_001	Banana	cytosol, mitochondrion	69.25	84.87
HORVU2Hr1G109370.1	Barley	cytosol, plastid	87.66	82.97
HORVU2Hr1G110120.3	Barley	cytosol, plastid	88.08	82.71
Os11t0455500-01	Rice	extracellular, plasma membrane	86.4	80.19
Zm00001d004646_P001	Maize	cytosol	38.91	79.83
Solyc05g032820.1.1	Tomato	plastid	33.47	72.07
HORVU1Hr1G064320.1	Barley	plastid	9.21	36.97

Protein Annotations

KEGG:00270+3.3.1.1	Gene3D:3.40.50.1480	Gene3D:3.40.50.720	MapMan:7.3.2	InterPro:Adenosylhomocysteinase	InterPro:Adenosylhomocysteinase-like
InterPro:Ado_hCys_hydrolase_NAD-bd	EnsemblPlantsGene:Bra014002	EnsemblPlants:Bra014002.1	EnsemblPlants:Bra014002.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004013	GO:GO:0005488	GO:GO:0006139	GO:GO:0006730	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019510	GO:GO:0051287
UniProt:M4DBZ0	HAMAP:MF_00563	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00670	PFAM:PF05221	PIRSF:PIRSF001109
ScanProsite:PS00738	ScanProsite:PS00739	PANTHER:PTHR23420	PANTHER:PTHR23420:SF11	InterPro:S-Ado-L-homoCys_hydrolase_CS	SMART:SM00996
SMART:SM00997	SUPFAM:SSF51735	SUPFAM:SSF52283	TIGRFAMs:TIGR00936	UniParc:UPI0002546EB0	SEG:seg

Description

AT4G13940 (E=3e-253) HOG1, EMB1395, SAHH1, MEE58, ATSAHH1 | MEE58 (MATERNAL EFFECT EMBRYO ARREST 58); adenosylhomocysteinase/ copper ion binding

Coordinates

chrA08:-:4700749..4702429

Molecular Weight (calculated)

52706.5 Da

IEP (calculated)

4.975

GRAVY (calculated)

-0.071

Length

478 amino acids

Sequence
(BLAST)

001: MALIVEKTSS GREYKVKDMS QADFGRLELE LAEVEMPGLM ACRTEFGPAQ PFKGARITGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLQEYWWC TERALDWGPG GGPDLIVDDG GDATLLIHEG VKAEEIFEKT GQVPDPTSTD NPEFQIVLSI IKEGLQVDPK KYHKMKERLV
201: GVSEETTTGV KRLYQMQESG ALLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVICGY GDVGKGCAAA MKTAGARVIV TEIDPICALQ
301: AMMEGLQVLT LEDVVSEADI FVTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMQGL ETFPGVKRIT IKPQTDRWVF PDTNSGIIVL AEGRLMNLGC
401: ATGHPSFVMS CSFTNQVIAQ LELWNEKSSG KYEKKVYVLP KHLDEKVAAL HLGVWFSLWF VWKSGRYWSA DEVDQISF

Best Arabidopsis Sequence Match ( AT4G13940.1 )
(BLAST)

001: MALLVEKTSS GREYKVKDMS QADFGRLELE LAEVEMPGLM ACRTEFGPSQ PFKGARITGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLQEYWWC TERALDWGPG GGPDLIVDDG GDATLLIHEG VKAEEIFEKT GQVPDPTSTD NPEFQIVLSI IKEGLQVDPK KYHKMKERLV
201: GVSEETTTGV KRLYQMQQNG TLLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVICGY GDVGKGCAAA MKTAGARVIV TEIDPICALQ
301: ALMEGLQVLT LEDVVSEADI FVTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMLGL ETYPGVKRIT IKPQTDRWVF PETKAGIIVL AEGRLMNLGC
401: ATGHPSFVMS CSFTNQVIAQ LELWNEKASG KYEKKVYVLP KHLDEKVALL HLGKLGARLT KLSKDQSDYV SIPIEGPYKP PHYRY

Arabidopsis Description

SAHH1Adenosylhomocysteinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O23255]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.