Factsheet for Solyc05g032820.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
vacuole 3
cytosol 1
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d004646_P001	Maize	cytosol	65.32	62.23
CDY67319	Canola	cytosol	44.14	53.26
GSMUA_Achr8P17490_001	Banana	cytosol, mitochondrion	71.17	40.51
GSMUA_Achr9P01630_001	Banana	cytosol	72.52	37.88
GSMUA_Achr6P06530_001	Banana	cytosol	71.62	37.41
Solyc12g098500.1.1	Tomato	cytosol, extracellular, nucleus, plastid, unclear	78.38	35.88
Solyc09g092380.2.1	Tomato	extracellular	75.68	34.64
Solyc09g092390.2.1	Tomato	extracellular	75.68	34.64
KRH31567	Soybean	cytosol, mitochondrion	74.77	34.23
VIT_05s0029g00330.t01	Wine grape	cytosol	74.77	34.23
AT4G13940.1	Thale cress	cytosol	74.77	34.23
Bra028345.1-P	Field mustard	cytosol	74.32	34.02
AT3G23810.1	Thale cress	cytosol	74.32	34.02
CDY58805	Canola	cytosol	72.52	33.89
Zm00001d049239_P001	Maize	plasma membrane, plastid	73.87	33.81
KXG28344	Sorghum	cytosol	73.87	33.81
KRH42750	Soybean	endoplasmic reticulum, nucleus	73.87	33.81
Bra001921.1-P	Field mustard	cytosol	73.87	33.81
CDY47309	Canola	cytosol	73.87	33.74
CDX85127	Canola	cytosol	72.07	33.68
Bra014984.1-P	Field mustard	cytosol	73.42	33.61
TraesCS2B01G521600.2	Wheat	cytosol, golgi, plastid	73.42	33.61
Bra014002.1-P	Field mustard	cytosol	72.07	33.47
CDY50423	Canola	cytosol	72.97	33.4
TraesCS2D01G493500.1	Wheat	cytosol	72.97	33.4
CDY01177	Canola	cytosol, extracellular	72.97	33.4
TraesCS2A01G493600.2	Wheat	cytosol, golgi, unclear	72.97	33.4
TraesCS2D01G489900.1	Wheat	cytosol	72.52	33.2
TraesCS2B01G517500.1	Wheat	cytosol, extracellular, golgi	72.52	33.2
TraesCS2A01G489600.2	Wheat	cytosol, golgi, unclear	72.52	33.2
Bra032750.1-P	Field mustard	cytosol	72.52	33.2
CDX77483	Canola	cytosol	67.57	32.61
KRH58847	Soybean	nucleus	73.42	32.41
HORVU2Hr1G109370.1	Barley	cytosol, plastid	72.52	31.88
HORVU2Hr1G110120.3	Barley	cytosol, plastid	72.97	31.83
CDY53211	Canola	cytosol	67.57	31.51
Os11t0455500-01	Rice	extracellular, plasma membrane	72.97	31.46
CDY18090	Canola	cytosol	68.02	29.72
CDY50106	Canola	cytosol	68.02	29.72
HORVU1Hr1G064320.1	Barley	plastid	4.05	7.56
HORVU7Hr1G023890.1	Barley	cytosol	0.45	1.54

Protein Annotations

KEGG:00270+3.3.1.1	Gene3D:3.40.50.1480	Gene3D:3.40.50.720	MapMan:50.3.3	InterPro:Adenosylhomocysteinase-like	InterPro:Ado_hCys_hydrolase_NAD-bd
GO:GO:0003674	GO:GO:0003824	GO:GO:0004013	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0033353	UniProt:K4C063	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00670	PFAM:PF05221
PANTHER:PTHR23420	PANTHER:PTHR23420:SF11	SMART:SM00996	SMART:SM00997	SUPFAM:SSF51735	SignalP:SignalP-noTM
EnsemblPlantsGene:Solyc05g032820.1	EnsemblPlants:Solyc05g032820.1.1	UniParc:UPI00027660C7	:	:	:

Description

No Description!

Coordinates

chr5:-:44597440..44598853

Molecular Weight (calculated)

24654.4 Da

IEP (calculated)

7.372

GRAVY (calculated)

0.106

Length

222 amino acids

Sequence
(BLAST)

001: MQANGSLFSL PLMLMTLSPR SRCRHSVSDG LMRDTDVMIA GKVALIAGYG DVGNGCVVAM KQAGASVIVT EIDPICALQA IMEGLQVLPI EDLVSEIYIF
101: VTTTGNKVII MVDHMRKMKN NSIVCNIGHF DNEIDMLDLE TYPGLKRITI KPQTDRWAFL DNKSGIIVLA EGRLMNLGCD IRHPTFAMSC FFTNQVIAQL
201: ELWKEKASDN YEKKVRLSKA PR

Best Arabidopsis Sequence Match ( AT4G13940.3 )
(BLAST)

001: MALLVEKTSS GREYKVKDMS QADFGRLELE LAEVEMPGLM ACRTEFGPSQ PFKGARITGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAGVKAEE IFEKTGQVPD PTSTDNPEFQ IVLSIIKEGL QVDPKKYHKM KERLVGVSEE TTTGVKRLYQ MQQNGTLLFP AINVNDSVTK SKFDNLYGCR
201: HSLPDGLMRA TDVMIAGKVA VICGYGDVGK GCAAAMKTAG ARVIVTEIDP ICALQALMEG LQVLTLEDVV SEADIFVTTT GNKDIIMVDH MRKMKNNAIV
301: CNIGHFDNEI DMLGLETYPG VKRITIKPQT DRWVFPETKA GIIVLAEGRL MNLGCATGHP SFVMSCSFTN QVIAQLELWN EKASGKYEKK VYVLPKHLDE
401: KVALLHLGKL GARLTKLSKD QSDYVSIPIE GPYKPPHYRY

Arabidopsis Description

SAHH1Adenosylhomocysteinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O23255]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.