CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77483	Canola	cytosol	95.17	98.48
AT3G23810.1	Thale cress	cytosol	94.33	92.58
CDY47309	Canola	cytosol	93.28	91.36
CDY01177	Canola	cytosol, extracellular	92.86	91.13
CDY50423	Canola	cytosol	92.44	90.72
CDX85127	Canola	cytosol	89.71	89.89
CDY18090	Canola	cytosol	95.17	89.17
CDY50106	Canola	cytosol	95.17	89.17
VIT_05s0029g00330.t01	Wine grape	cytosol	88.45	86.8
KRH31567	Soybean	cytosol, mitochondrion	88.24	86.6
CDY58805	Canola	cytosol	86.34	86.53
Solyc09g092390.2.1	Tomato	extracellular	88.03	86.39
PGSC0003DMT400011624	Potato	cytosol	87.82	86.19
Solyc09g092380.2.1	Tomato	extracellular	87.82	86.19
GSMUA_Achr9P01630_001	Banana	cytosol	76.68	85.88
Solyc12g098500.1.1	Tomato	cytosol, extracellular, nucleus, plastid, unclear	87.39	85.77
GSMUA_Achr6P06530_001	Banana	cytosol	76.26	85.41
GSMUA_Achr8P17490_001	Banana	cytosol, mitochondrion	68.7	83.85
CDY67319	Canola	cytosol	31.93	82.61
Solyc05g032820.1.1	Tomato	plastid	31.51	67.57
CDY40156	Canola	cytosol	10.71	56.67

Protein Annotations

KEGG:00270+3.3.1.1	Gene3D:3.40.50.1480	Gene3D:3.40.50.720	MapMan:7.3.2	GO:A0A078ITS0	UniProt:A0A078ITS0
InterPro:Adenosylhomocysteinase-like	InterPro:Ado_hCys_hydrolase_NAD-bd	EnsemblPlants:CDY53211	ProteinID:CDY53211	ProteinID:CDY53211.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004013	GO:GO:0006730	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00010214001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00670	PFAM:PF05221	PIRSF:PIRSF001109
ScanProsite:PS00738	ScanProsite:PS00739	PANTHER:PTHR23420	PANTHER:PTHR23420:SF11	MetaCyc:PWY-5041	InterPro:S-Ado-L-homoCys_hydrolase_CS
SMART:SM00996	SMART:SM00997	SUPFAM:SSF51735	SUPFAM:SSF52283	TIGRFAMs:TIGR00936	UniPathway:UPA00314
UniParc:UPI0004EDFB4E	SEG:seg	:	:	:	:

Description

BnaC03g74050DAdenosylhomocysteinase [Source:UniProtKB/TrEMBL;Acc:A0A078ITS0]

Coordinates

chrLK033175:+:50560..53204

Molecular Weight (calculated)

52053.9 Da

IEP (calculated)

4.970

GRAVY (calculated)

-0.029

Length

476 amino acids

Sequence
(BLAST)

001: MALLVEKTSS GREYKVKDMS QADFGRLEIE LAEVEMPGLV SCCTEFGPSQ PLKGARITGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLQEYWWC TERALDWGPG GGPDLIVDDG GDATLLIHEG VKAEEIFAKT GQVPDPSSTD NPEFQIVLSI IKDGLQVDPK KYHKMKERLV
201: GVSEETTTGV KRLYQMQETG ALLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVICGY GDVGKGCAAA MKTAGARVIV TEIDPICALQ
301: ALMEGLQVLT LEDVVSEADI FCTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMQGL ETFPGVKRIT IKPQTDRWVF PDTKSGIIVL AEGRLMNLGC
401: ATGHPSFVMS CSFTNQHLDE KVAALHLGKL GARLTKLTKD QSDYVSIPIE GPYKPGHYRP FELVWVLVEE CEILVF

Best Arabidopsis Sequence Match ( AT3G23810.1 )
(BLAST)

001: MALLVEKTSS GREYKVKDMS QADFGRLEIE LAEVEMPGLV SCVTEFGPSQ PLKGARITGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLQEYWWC TERALDWGPG GGPDLIVDDG GDATLLIHEG VKAEEIFAKN GTFPDPTSTD NPEFQIVLSI IKDGLQVDPK KYHKMKERLV
201: GVSEETTTGV KRLYQMQETG ALLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVICGY GDVGKGCAAA MKTAGARVIV TEIDPICALQ
301: ALMEGLQVLT LEDVVSEADI FCTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMLGL ETYPGVKRIT IKPQTDRWVF PDTNSGIIVL AEGRLMNLGC
401: ATGHPSFVMS CSFTNQVIAQ LELWNEKSSG KYEKKVYVLP KHLDEKVAAL HLGKLGARLT KLTKDQSDYV SIPVEGPYKP VHYRY

Arabidopsis Description

SAHH2Adenosylhomocysteinase [Source:UniProtKB/TrEMBL;Acc:A0A178VEP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.