CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53211	Canola	cytosol	98.48	95.17
AT3G23810.1	Thale cress	cytosol	98.48	93.4
CDY01177	Canola	cytosol, extracellular	96.52	91.55
CDY47309	Canola	cytosol	96.52	91.36
CDY50423	Canola	cytosol	96.09	91.13
CDX85127	Canola	cytosol	93.7	90.74
CDY18090	Canola	cytosol	98.26	88.98
CDY50106	Canola	cytosol	98.26	88.98
KRH31567	Soybean	cytosol, mitochondrion	92.17	87.42
VIT_05s0029g00330.t01	Wine grape	cytosol	91.52	86.8
Solyc09g092380.2.1	Tomato	extracellular	91.52	86.8
PGSC0003DMT400011624	Potato	cytosol	91.52	86.8
CDY58805	Canola	cytosol	89.57	86.74
Solyc09g092390.2.1	Tomato	extracellular	91.3	86.6
Solyc12g098500.1.1	Tomato	cytosol, extracellular, nucleus, plastid, unclear	91.09	86.39
GSMUA_Achr9P01630_001	Banana	cytosol	79.78	86.35
GSMUA_Achr6P06530_001	Banana	cytosol	79.78	86.35
GSMUA_Achr8P17490_001	Banana	cytosol, mitochondrion	71.52	84.36
CDY67319	Canola	cytosol	32.17	80.43
Solyc05g032820.1.1	Tomato	plastid	32.61	67.57
CDY40156	Canola	cytosol	11.09	56.67

Protein Annotations

KEGG:00270+3.3.1.1	Gene3D:3.40.50.1480	Gene3D:3.40.50.720	MapMan:7.3.2	GO:A0A078CQS8	InterPro:Adenosylhomocysteinase-like
InterPro:Ado_hCys_hydrolase_NAD-bd	EnsemblPlants:CDX77483	ProteinID:CDX77483	ProteinID:CDX77483.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004013	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00128352001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00670	PFAM:PF05221
PIRSF:PIRSF001109	ScanProsite:PS00738	ScanProsite:PS00739	PANTHER:PTHR23420	PANTHER:PTHR23420:SF11	MetaCyc:PWY-5041
InterPro:S-Ado-L-homoCys_hydrolase_CS	SMART:SM00996	SMART:SM00997	SUPFAM:SSF51735	SUPFAM:SSF52283	TIGRFAMs:TIGR00936
UniPathway:UPA00314	UniParc:UPI0004EDAE93	SEG:seg	:	:	:

Description

BnaA07g06210D

Coordinates

chrLK031811:+:1071786..1074219

Molecular Weight (calculated)

50264.7 Da

IEP (calculated)

5.475

GRAVY (calculated)

-0.075

Length

460 amino acids

Sequence
(BLAST)

001: MALLVEKTSS GREYKVKDMS QADFGRLEIE LAEVEMPGLV SCRTEFGPSQ PLKGARITGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLQEYWWC TERALDWGPG GGPDLIVDDG GDATLLIHEG VKAEEIFAKT GQVPDPTSTD NPEFQIVLSI IKDGLQVDPK KYHKMKERLV
201: GVSEETTTGV KRLYQMQETG ALLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVICGY GDVGKGCAAA MKTAGARVIV TEIDPICALQ
301: ALMEGLQVLT LEDVVSEADI FCTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMLGL ETFPGVKRIT IKPQTDRWVF PDTKTGIIVL AEGRLMNLGC
401: ATGHPSFVMS CSFTNQHLDE KVAALHLGKL GARLTKLTKD QSDYVSIPVE GPYKPVHYRY

Best Arabidopsis Sequence Match ( AT3G23810.1 )
(BLAST)

001: MALLVEKTSS GREYKVKDMS QADFGRLEIE LAEVEMPGLV SCVTEFGPSQ PLKGARITGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLQEYWWC TERALDWGPG GGPDLIVDDG GDATLLIHEG VKAEEIFAKN GTFPDPTSTD NPEFQIVLSI IKDGLQVDPK KYHKMKERLV
201: GVSEETTTGV KRLYQMQETG ALLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVICGY GDVGKGCAAA MKTAGARVIV TEIDPICALQ
301: ALMEGLQVLT LEDVVSEADI FCTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMLGL ETYPGVKRIT IKPQTDRWVF PDTNSGIIVL AEGRLMNLGC
401: ATGHPSFVMS CSFTNQVIAQ LELWNEKSSG KYEKKVYVLP KHLDEKVAAL HLGKLGARLT KLTKDQSDYV SIPVEGPYKP VHYRY

Arabidopsis Description

SAHH2Adenosylhomocysteinase [Source:UniProtKB/TrEMBL;Acc:A0A178VEP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.