CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01177	Canola	cytosol, extracellular	99.59	99.59
Bra032750.1-P	Field mustard	cytosol	99.38	99.38
CDY47309	Canola	cytosol	98.56	98.35
AT4G13940.1	Thale cress	cytosol	96.7	96.7
CDX77483	Canola	cytosol	91.13	96.09
CDX85127	Canola	cytosol	91.34	93.26
CDY58805	Canola	cytosol	91.34	93.26
CDY53211	Canola	cytosol	90.72	92.44
Solyc09g092390.2.1	Tomato	extracellular	92.16	92.16
Solyc09g092380.2.1	Tomato	extracellular	92.16	92.16
GSMUA_Achr9P01630_001	Banana	cytosol	80.41	91.76
PGSC0003DMT400011624	Potato	cytosol	91.34	91.34
KRH31567	Soybean	cytosol, mitochondrion	91.34	91.34
VIT_05s0029g00330.t01	Wine grape	cytosol	91.13	91.13
Solyc12g098500.1.1	Tomato	cytosol, extracellular, nucleus, plastid, unclear	90.93	90.93
GSMUA_Achr6P06530_001	Banana	cytosol	79.38	90.59
GSMUA_Achr8P17490_001	Banana	cytosol, mitochondrion	72.78	90.51
CDY50106	Canola	cytosol	91.34	87.2
CDY18090	Canola	cytosol	91.34	87.2
CDY67319	Canola	cytosol	30.31	79.89
Solyc05g032820.1.1	Tomato	plastid	33.4	72.97
CDY40156	Canola	cytosol	11.55	62.22

Protein Annotations

KEGG:00270+3.3.1.1	Gene3D:3.40.50.1480	Gene3D:3.40.50.720	MapMan:7.3.2	GO:A0A078IN20	UniProt:A0A078IN20
InterPro:Adenosylhomocysteinase	InterPro:Adenosylhomocysteinase-like	InterPro:Ado_hCys_hydrolase_NAD-bd	EnsemblPlants:CDY50423	ProteinID:CDY50423	ProteinID:CDY50423.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004013	GO:GO:0005488	GO:GO:0006139
GO:GO:0006730	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0019510	GO:GO:0051287	EnsemblPlantsGene:GSBRNA2T00096663001	HAMAP:MF_00563	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00670
PFAM:PF05221	PIRSF:PIRSF001109	ScanProsite:PS00738	ScanProsite:PS00739	PANTHER:PTHR23420	PANTHER:PTHR23420:SF11
MetaCyc:PWY-5041	InterPro:S-Ado-L-homoCys_hydrolase_CS	SMART:SM00996	SMART:SM00997	SUPFAM:SSF51735	SUPFAM:SSF52283
TIGRFAMs:TIGR00936	UniPathway:UPA00314	UniParc:UPI0004EF1577	SEG:seg	:	:

Description

BnaCnng19320DAdenosylhomocysteinase [Source:UniProtKB/TrEMBL;Acc:A0A078IN20]

Coordinates

chrLK032908:+:38983..41036

Molecular Weight (calculated)

53261.4 Da

IEP (calculated)

5.661

GRAVY (calculated)

-0.103

Length

485 amino acids

Sequence
(BLAST)

001: MALVVEKTSS GREYKVKDMS QADFGRLELE LAEVEMPGLM ACRTEFGPSQ PFKGARITGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLQEYWWC TERALDWGPG AGPDLIVDDG GDATLLIHEG VKAEEIFEKT GQVPDPTSTD NPEFQIVLSI IKEGLQVDPK KYHKMKERLV
201: GVSEETTTGV KRLYQMQEAG ALLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVVVVCGY GDVGKGCAAA MKTAGARVIV TEIDPICALQ
301: AMMEGLQVLT LEDVVSEADI FVTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMLGL ETFPGVKRIT IKPQTDRWVF PDTKSGIIVL AEGRLMNLGC
401: ATGHPSFVMS CSFTNQVIAQ LELWNEKSSG KYEKKVYVLP KHLDEKVAAL HLGKLGAKLT KLTKDQSDYV SIPIEGPYKP AHYRY

Best Arabidopsis Sequence Match ( AT4G13940.1 )
(BLAST)

001: MALLVEKTSS GREYKVKDMS QADFGRLELE LAEVEMPGLM ACRTEFGPSQ PFKGARITGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLQEYWWC TERALDWGPG GGPDLIVDDG GDATLLIHEG VKAEEIFEKT GQVPDPTSTD NPEFQIVLSI IKEGLQVDPK KYHKMKERLV
201: GVSEETTTGV KRLYQMQQNG TLLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVICGY GDVGKGCAAA MKTAGARVIV TEIDPICALQ
301: ALMEGLQVLT LEDVVSEADI FVTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMLGL ETYPGVKRIT IKPQTDRWVF PETKAGIIVL AEGRLMNLGC
401: ATGHPSFVMS CSFTNQVIAQ LELWNEKASG KYEKKVYVLP KHLDEKVALL HLGKLGARLT KLSKDQSDYV SIPIEGPYKP PHYRY

Arabidopsis Description

SAHH1Adenosylhomocysteinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O23255]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.