Factsheet for AT4G13940.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01177	Canola	cytosol, extracellular	96.91	96.91
CDY47309	Canola	cytosol	96.91	96.71
Bra032750.1-P	Field mustard	cytosol	96.7	96.7
CDY50423	Canola	cytosol	96.7	96.7
AT3G23810.1	Thale cress	cytosol	95.26	95.26
TraesCS2B01G521600.2	Wheat	cytosol, golgi, plastid	92.78	92.78
Bra014002.1-P	Field mustard	cytosol	91.13	92.47
CDY58805	Canola	cytosol	90.52	92.42
TraesCS2D01G493500.1	Wheat	cytosol	92.16	92.16
KRH31567	Soybean	cytosol, mitochondrion	92.16	92.16
TraesCS2A01G493600.2	Wheat	cytosol, golgi, unclear	92.16	92.16
VIT_05s0029g00330.t01	Wine grape	cytosol	92.16	92.16
PGSC0003DMT400011624	Potato	cytosol	91.96	91.96
GSMUA_Achr9P01630_001	Banana	cytosol	80.41	91.76
Solyc12g098500.1.1	Tomato	cytosol, extracellular, nucleus, plastid, unclear	91.55	91.55
Solyc09g092390.2.1	Tomato	extracellular	91.34	91.34
KXG28344	Sorghum	cytosol	91.34	91.34
Solyc09g092380.2.1	Tomato	extracellular	91.13	91.13
TraesCS2B01G517500.1	Wheat	cytosol, extracellular, golgi	91.13	91.13
TraesCS2D01G489900.1	Wheat	cytosol	90.93	90.93
Zm00001d049239_P001	Maize	plasma membrane, plastid	90.93	90.93
HORVU7Hr1G023890.1	Barley	cytosol	12.16	90.77
TraesCS2A01G489600.2	Wheat	cytosol, golgi, unclear	90.72	90.72
GSMUA_Achr8P17490_001	Banana	cytosol, mitochondrion	72.78	90.51
GSMUA_Achr6P06530_001	Banana	cytosol	79.18	90.35
Zm00001d004646_P001	Maize	cytosol	42.68	88.84
HORVU2Hr1G110120.3	Barley	cytosol, plastid	92.58	88.21
HORVU2Hr1G109370.1	Barley	cytosol, plastid	91.34	87.72
Os11t0455500-01	Rice	extracellular, plasma membrane	89.69	84.47
Solyc05g032820.1.1	Tomato	plastid	34.23	74.77
HORVU1Hr1G064320.1	Barley	plastid	9.28	37.82

Protein Annotations

KEGG:00270+3.3.1.1	Gene3D:3.40.50.1480	Gene3D:3.40.50.720	MapMan:7.3.2	EntrezGene:827028	UniProt:A0A178UZR5
ProteinID:AEE83345.1	EMBL:AF059581	EMBL:AF325037	ArrayExpress:AT4G13940	EnsemblPlantsGene:AT4G13940	RefSeq:AT4G13940
TAIR:AT4G13940	RefSeq:AT4G13940-TAIR-G	EnsemblPlants:AT4G13940.1	TAIR:AT4G13940.1	EMBL:AY042866	EMBL:AY049279
EMBL:AY081468	EMBL:AY085669	EMBL:AY090284	InterPro:Adenosylhomocysteinase	InterPro:Adenosylhomocysteinase-like	InterPro:Ado_hCys_hydrolase_NAD-bd
Unigene:At.24056	EMBL:BT002404	ProteinID:CAB10173.1	ProteinID:CAB78436.1	GO:GO:0000003	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004013	GO:GO:0005488	GO:GO:0005507	GO:GO:0005515
GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005774	GO:GO:0005829	GO:GO:0005886	GO:GO:0006139	GO:GO:0006259	GO:GO:0006346
GO:GO:0006730	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058
GO:GO:0009506	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0016441	GO:GO:0016787	GO:GO:0019510	GO:GO:0033353	GO:GO:0040029
GO:GO:0048046	GO:GO:0051287	Symbol:HOG1	HAMAP:MF_00563	InterPro:NAD(P)-bd_dom_sf	RefSeq:NP_193130.1
UniProt:O23255	ProteinID:OAO98322.1	PFAM:PF00670	PFAM:PF05221	PIRSF:PIRSF001109	PO:PO:0000005
PO:PO:0000013	PO:PO:0000037	PO:PO:0000056	PO:PO:0000230	PO:PO:0000282	PO:PO:0000290
PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0005020	PO:PO:0005052	PO:PO:0005417	PO:PO:0006339
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007131	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009001	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020003
PO:PO:0020030	PO:PO:0020038	PO:PO:0020048	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025195	PO:PO:0025281	ScanProsite:PS00738	ScanProsite:PS00739	PANTHER:PTHR23420	PANTHER:PTHR23420:SF11
InterPro:S-Ado-L-homoCys_hydrolase_CS	SMART:SM00996	SMART:SM00997	SUPFAM:SSF51735	SUPFAM:SSF52283	TIGRFAMs:TIGR00936
UniParc:UPI0000000A82	EMBL:Z97059	SEG:seg	:	:	:

Description

SAHH1Adenosylhomocysteinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O23255]

Coordinates

chr4:+:8054673..8057152

Molecular Weight (calculated)

53381.6 Da

IEP (calculated)

5.828

GRAVY (calculated)

-0.127

Length

485 amino acids

Sequence
(BLAST)

001: MALLVEKTSS GREYKVKDMS QADFGRLELE LAEVEMPGLM ACRTEFGPSQ PFKGARITGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLQEYWWC TERALDWGPG GGPDLIVDDG GDATLLIHEG VKAEEIFEKT GQVPDPTSTD NPEFQIVLSI IKEGLQVDPK KYHKMKERLV
201: GVSEETTTGV KRLYQMQQNG TLLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVICGY GDVGKGCAAA MKTAGARVIV TEIDPICALQ
301: ALMEGLQVLT LEDVVSEADI FVTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMLGL ETYPGVKRIT IKPQTDRWVF PETKAGIIVL AEGRLMNLGC
401: ATGHPSFVMS CSFTNQVIAQ LELWNEKASG KYEKKVYVLP KHLDEKVALL HLGKLGARLT KLSKDQSDYV SIPIEGPYKP PHYRY

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.