CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049239_P001	Maize	plasma membrane, plastid	98.97	98.97
GSMUA_Achr9P01630_001	Banana	cytosol	84.54	96.47
TraesCS2B01G521600.2	Wheat	cytosol, golgi, plastid	95.05	95.05
GSMUA_Achr8P17490_001	Banana	cytosol, mitochondrion	76.29	94.87
Zm00001d004646_P001	Maize	cytosol	45.57	94.85
TraesCS2D01G493500.1	Wheat	cytosol	94.43	94.43
TraesCS2A01G493600.2	Wheat	cytosol, golgi, unclear	94.43	94.43
GSMUA_Achr6P06530_001	Banana	cytosol	82.47	94.12
TraesCS2B01G517500.1	Wheat	cytosol, extracellular, golgi	94.02	94.02
TraesCS2D01G489900.1	Wheat	cytosol	93.61	93.61
TraesCS2A01G489600.2	Wheat	cytosol, golgi, unclear	93.4	93.4
VIT_05s0029g00330.t01	Wine grape	cytosol	92.37	92.37
Bra032750.1-P	Field mustard	cytosol	92.16	92.16
Bra001921.1-P	Field mustard	cytosol	91.75	91.75
PGSC0003DMT400011624	Potato	cytosol	91.55	91.55
Bra014984.1-P	Field mustard	cytosol	91.55	91.55
AT4G13940.1	Thale cress	cytosol	91.34	91.34
AT3G23810.1	Thale cress	cytosol	91.13	91.13
Solyc09g092390.2.1	Tomato	extracellular	91.13	91.13
Solyc12g098500.1.1	Tomato	cytosol, extracellular, nucleus, plastid, unclear	91.13	91.13
Bra028345.1-P	Field mustard	cytosol	90.93	90.93
VIT_17s0000g09840.t01	Wine grape	cytosol	90.72	90.72
Solyc09g092380.2.1	Tomato	extracellular	90.52	90.52
HORVU2Hr1G110120.3	Barley	cytosol, plastid	94.85	90.37
HORVU2Hr1G109370.1	Barley	cytosol, plastid	94.02	90.3
Os11t0455500-01	Rice	extracellular, plasma membrane	95.26	89.71
Bra014002.1-P	Field mustard	cytosol	86.39	87.66
Solyc05g032820.1.1	Tomato	plastid	33.81	73.87
CDY40156	Canola	cytosol	10.52	56.67
KRG89762	Soybean	plastid	22.06	45.73

Protein Annotations

KEGG:00270+3.3.1.1	Gene3D:3.40.50.1480	Gene3D:3.40.50.720	MapMan:7.3.2	UniProt:A0A1B6PRP0	InterPro:Adenosylhomocysteinase
InterPro:Adenosylhomocysteinase-like	InterPro:Ado_hCys_hydrolase_NAD-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004013
GO:GO:0005488	GO:GO:0006139	GO:GO:0006730	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0019510	GO:GO:0051287	EnsemblPlants:KXG28344	ProteinID:KXG28344
ProteinID:KXG28344.1	HAMAP:MF_00563	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00670	PFAM:PF05221	PIRSF:PIRSF001109
ScanProsite:PS00738	ScanProsite:PS00739	PANTHER:PTHR23420	PANTHER:PTHR23420:SF12	MetaCyc:PWY-5041	InterPro:S-Ado-L-homoCys_hydrolase_CS
SMART:SM00996	SMART:SM00997	EnsemblPlantsGene:SORBI_3005G112800	SUPFAM:SSF51735	SUPFAM:SSF52283	TIGRFAMs:TIGR00936
UniParc:UPI0001FCD817	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:40185844..40188679

Molecular Weight (calculated)

53229.3 Da

IEP (calculated)

6.002

GRAVY (calculated)

-0.143

Length

485 amino acids

Sequence
(BLAST)

001: MALSVEKTSS GREHKVKDLS QADFGRLEIE LAEVEMPGLM ACRAEFGPSK PFAGARISGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLEEYWWC TERCLDWGEG GGPDLIVDDG GDATLLIHEG VKAEEEYEKT GKIPDPESTD NAEFKIVLTI IRDGLKADPK KYRKMKERLV
201: GVSEETTTGV KRLYQMQETG ALLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVVCGY GDVGKGCAAA LKQAGARVIV TEIDPICALQ
301: ALMEGLQVLT LEDVVSEADI FVTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMLGL ETYPGVKRIT IKPQTDRWVF PETKTGIIVL AEGRLMNLGC
401: ATGHPSFVMS CSFTNQVIAQ LELWKEKSSG KYEKKVYVLP KHLDEKVAAL HLGKLGAKLT KLTKSQADYI SVPIEGPYKP AHYRY

Best Arabidopsis Sequence Match ( AT4G13940.1 )
(BLAST)

001: MALLVEKTSS GREYKVKDMS QADFGRLELE LAEVEMPGLM ACRTEFGPSQ PFKGARITGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLQEYWWC TERALDWGPG GGPDLIVDDG GDATLLIHEG VKAEEIFEKT GQVPDPTSTD NPEFQIVLSI IKEGLQVDPK KYHKMKERLV
201: GVSEETTTGV KRLYQMQQNG TLLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVICGY GDVGKGCAAA MKTAGARVIV TEIDPICALQ
301: ALMEGLQVLT LEDVVSEADI FVTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMLGL ETYPGVKRIT IKPQTDRWVF PETKAGIIVL AEGRLMNLGC
401: ATGHPSFVMS CSFTNQVIAQ LELWNEKASG KYEKKVYVLP KHLDEKVALL HLGKLGARLT KLSKDQSDYV SIPIEGPYKP PHYRY

Arabidopsis Description

SAHH1Adenosylhomocysteinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O23255]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.