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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • plastid 5
  • mitochondrion 2
  • peroxisome 1
  • endoplasmic reticulum 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:endoplasmic reticulum, mitochondrion, peroxisome, plastid
BaCelLo:plastid
EpiLoc:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:peroxisome, plastid
PProwler:plastid
TargetP:plastid
YLoc:endoplasmic reticulum
 plasma membrane: 18260611
extracellular: 18372294
plasma membrane: 18557835
extracellular: 21255809
plastid: 21433289
extracellular: 26072143
plasma membrane: 27800704
plastid: 27992503
msms PMID: 26072143 doi
B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 18557835 doi
SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis
Department of Biology Area 9, University of York, York YO10 5DD, UK.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
msms PMID: 21433289 doi
S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky
Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.
msms PMID: 21255809 doi
T Shinano, S Komatsu, T Yoshimura, S Tokutake, FJ Kong, T Watanabe, J Wasaki, M Osaki
National Agriculture and Food Research Organization, National Agricultural Research Center for Hokkaido Region, 1-Hitsujigaoka, Toyohira-ku, Sapporo 062-8555, Japan. shinano@affrc.go.jp
msms PMID: 18372294 doi
T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa
Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG28344 Sorghum cytosol 89.71 95.26
Zm00001d049239_P001 Maize plasma membrane, plastid 89.32 94.85
TraesCS2B01G517500.1 Wheat cytosol, extracellular, golgi 88.54 94.02
TraesCS2B01G521600.2 Wheat cytosol, golgi, plastid 88.54 94.02
GSMUA_Achr8P17490_001 Banana cytosol, mitochondrion 71.07 93.85
TraesCS2A01G493600.2 Wheat cytosol, golgi, unclear 88.35 93.81
TraesCS2D01G493500.1 Wheat cytosol 88.35 93.81
TraesCS2D01G489900.1 Wheat cytosol 88.16 93.61
Zm00001d004646_P001 Maize cytosol 42.33 93.56
TraesCS2A01G489600.2 Wheat cytosol, golgi, unclear 87.96 93.4
GSMUA_Achr9P01630_001 Banana cytosol 76.7 92.94
GSMUA_Achr6P06530_001 Banana cytosol 75.73 91.76
HORVU2Hr1G109370.1 Barley cytosol, plastid 89.13 90.89
VIT_05s0029g00330.t01 Wine grape cytosol 85.44 90.72
Bra032750.1-P Field mustard cytosol 84.85 90.1
VIT_17s0000g09840.t01 Wine grape cytosol 84.85 90.1
PGSC0003DMT400011624 Potato cytosol 84.66 89.9
AT3G23810.1 Thale cress cytosol 84.66 89.9
Solyc09g092390.2.1 Tomato extracellular 84.47 89.69
Bra014984.1-P Field mustard cytosol 84.47 89.69
Bra001921.1-P Field mustard cytosol 84.47 89.69
AT4G13940.1 Thale cress cytosol 84.47 89.69
HORVU2Hr1G110120.3 Barley cytosol, plastid 88.54 89.59
Solyc09g092380.2.1 Tomato extracellular 84.27 89.48
Solyc12g098500.1.1 Tomato cytosol, extracellular, nucleus, plastid, unclear 84.27 89.48
Bra028345.1-P Field mustard cytosol 83.88 89.07
Bra014002.1-P Field mustard cytosol 80.19 86.4
Solyc05g032820.1.1 Tomato plastid 31.46 72.97
CDY40156 Canola cytosol 10.1 57.78
KRG89762 Soybean plastid 19.42 42.73
Protein Annotations
KEGG:00270+3.3.1.1Gene3D:3.40.50.1480Gene3D:3.40.50.720MapMan:7.3.2UniProt:A0A0P0Y1Y5InterPro:Adenosylhomocysteinase
InterPro:Adenosylhomocysteinase-likeInterPro:Ado_hCys_hydrolase_NAD-bdProteinID:BAT13921.1ProteinID:BAT13922.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004013GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005829GO:GO:0006139GO:GO:0006730GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009987GO:GO:0016787GO:GO:0019510GO:GO:0033353GO:GO:0051287
HAMAP:MF_00563InterPro:NAD(P)-bd_dom_sfEnsemblPlantsGene:Os11g0455500EnsemblPlants:Os11t0455500-01PFAM:PF00670PFAM:PF05221
PIRSF:PIRSF001109ScanProsite:PS00738ScanProsite:PS00739PANTHER:PTHR23420PANTHER:PTHR23420:SF12InterPro:S-Ado-L-homoCys_hydrolase_CS
SMART:SM00996SMART:SM00997SUPFAM:SSF51735SUPFAM:SSF52283TIGRFAMs:TIGR00936UniParc:UPI000393B6F9
SEG:seg:::::
Description
Similar to Adenosylhomocysteinase. (Os11t0455500-01);Similar to Adenosylhomocysteinase. (Os11t0455500-02)
Coordinates
chr11:-:15420145..15422972
Molecular Weight (calculated)
56773.7 Da
IEP (calculated)
7.215
GRAVY (calculated)
-0.168
Length
515 amino acids
Sequence
(BLAST)
001: RLLLLLPPLY PPTLSPSQIR SRKSSPPPLP WRSPWRRPRR GGSFKVKDLS QADFGRLEIE LAEVEMPGLM ACRAEFGPSQ PFKGARISGS LHMTIQTAVL
101: IETLTALGAE VRWCSCNIFS TQDHAAAAIA RDSAAVFAWK GETLEEYWWC TERCLDWGVG GGPDLIVDDG GDATLLIHEG VKAEEEFEKS GKVPDPESTD
201: NAEFKIVLTI IRDGLKSDPS KYRKMKERLV GVSEETTTGV KRLYQMQETG ALLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVVCGY
301: GDVGKGCAAA LKQAGARVIV TEIDPICALQ ALMEGLQVLT LEDVVSEADI FVTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMLGL ETYPGVKRIT
401: IKPQTDRWVF PETNTGIIVL AEGRLMNLGC ATGHPSFVMS CSFTNQVIAQ LELWKEKSTG KYEKKVYVLP KHLDEKVAAL HLGKLGARLT KLSKSQADYI
501: SVPVEGPYKP AHYRY
Best Arabidopsis Sequence Match ( AT4G13940.1 )
(BLAST)
001: MALLVEKTSS GREYKVKDMS QADFGRLELE LAEVEMPGLM ACRTEFGPSQ PFKGARITGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLQEYWWC TERALDWGPG GGPDLIVDDG GDATLLIHEG VKAEEIFEKT GQVPDPTSTD NPEFQIVLSI IKEGLQVDPK KYHKMKERLV
201: GVSEETTTGV KRLYQMQQNG TLLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVICGY GDVGKGCAAA MKTAGARVIV TEIDPICALQ
301: ALMEGLQVLT LEDVVSEADI FVTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMLGL ETYPGVKRIT IKPQTDRWVF PETKAGIIVL AEGRLMNLGC
401: ATGHPSFVMS CSFTNQVIAQ LELWNEKASG KYEKKVYVLP KHLDEKVALL HLGKLGARLT KLSKDQSDYV SIPIEGPYKP PHYRY
Arabidopsis Description
SAHH1Adenosylhomocysteinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O23255]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.