Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G023890.1 | Barley | cytosol | 21.85 | 40.0 |
| CDY40156 | Canola | cytosol | 26.89 | 35.56 |
| Bra001921.1-P | Field mustard | cytosol | 38.66 | 9.48 |
| GSMUA_Achr6P06530_001 | Banana | cytosol | 33.61 | 9.41 |
| AT4G13940.1 | Thale cress | cytosol | 37.82 | 9.28 |
| Bra014984.1-P | Field mustard | cytosol | 37.82 | 9.28 |
| Bra032750.1-P | Field mustard | cytosol | 37.82 | 9.28 |
| Bra014002.1-P | Field mustard | cytosol | 36.97 | 9.21 |
| Bra028345.1-P | Field mustard | cytosol | 36.97 | 9.07 |
| AT3G23810.1 | Thale cress | cytosol | 36.97 | 9.07 |
| VIT_05s0029g00330.t01 | Wine grape | cytosol | 36.13 | 8.87 |
| PGSC0003DMT400011624 | Potato | cytosol | 36.13 | 8.87 |
| Solyc12g098500.1.1 | Tomato | cytosol, extracellular, nucleus, plastid, unclear | 36.13 | 8.87 |
| HORVU2Hr1G110120.3 | Barley | cytosol, plastid | 37.82 | 8.84 |
| HORVU2Hr1G109370.1 | Barley | cytosol, plastid | 36.97 | 8.71 |
| GSMUA_Achr9P01630_001 | Banana | cytosol | 31.09 | 8.71 |
| VIT_17s0000g09840.t01 | Wine grape | cytosol | 35.29 | 8.66 |
| GSMUA_Achr8P17490_001 | Banana | cytosol, mitochondrion | 27.73 | 8.46 |
| Solyc09g092380.2.1 | Tomato | extracellular | 34.45 | 8.45 |
| Solyc09g092390.2.1 | Tomato | extracellular | 34.45 | 8.45 |
| Solyc05g032820.1.1 | Tomato | plastid | 7.56 | 4.05 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G064320.1 | EnsemblPlantsGene:HORVU1Hr1G064320 | Gene3D:3.40.50.1480 | InterPro:Adenosylhomocysteinase-like | KEGG:00270+3.3.1.1 | PANTHER:PTHR23420 |
| PANTHER:PTHR23420:SF12 | PFAM:PF05221 | SEG:seg | SUPFAM:SSF52283 | UniParc:UPI000B4780B2 | UniProt:A0A287FYY9 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:460481037..460482026
Molecular Weight (calculated)
12300.7 Da
IEP (calculated)
11.718
GRAVY (calculated)
-0.069
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: GIWATSSPPT PTLYHSRLLS SLPPITLLSP PQDLIHQPSS CRTEFGPSQP FKGTRIAGSL HMTIQTAVLI ETGATLVLLA RTSRSTGGAM SASSNRAPVA
101: APTSSSTTAA TPRCSSTRA
101: APTSSSTTAA TPRCSSTRA
001: MALLVEKTSS GREYKVKDMS QADFGRLELE LAEVEMPGLM ACRTEFGPSQ PFKGARITGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLQEYWWC TERALDWGPG GGPDLIVDDG GDATLLIHEG VKAEEIFEKT GQVPDPTSTD NPEFQIVLSI IKEGLQVDPK KYHKMKERLV
201: GVSEETTTGV KRLYQMQQNG TLLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVICGY GDVGKGCAAA MKTAGARVIV TEIDPICALQ
301: ALMEGLQVRI YLWFCVGLWW ESGTV
101: RDSAAVFAWK GETLQEYWWC TERALDWGPG GGPDLIVDDG GDATLLIHEG VKAEEIFEKT GQVPDPTSTD NPEFQIVLSI IKEGLQVDPK KYHKMKERLV
201: GVSEETTTGV KRLYQMQQNG TLLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVICGY GDVGKGCAAA MKTAGARVIV TEIDPICALQ
301: ALMEGLQVRI YLWFCVGLWW ESGTV
Arabidopsis Description
SAHH1Adenosylhomocysteinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O23255]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.