CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77483	Canola	cytosol	90.74	93.7
Bra014984.1-P	Field mustard	cytosol	95.58	93.61
AT3G23810.1	Thale cress	cytosol	94.53	92.58
CDY58805	Canola	cytosol	91.79	91.79
CDY01177	Canola	cytosol, extracellular	93.68	91.75
CDY47309	Canola	cytosol	93.68	91.56
CDY50423	Canola	cytosol	93.26	91.34
CDY53211	Canola	cytosol	89.89	89.71
KRH31567	Soybean	cytosol, mitochondrion	89.05	87.22
VIT_05s0029g00330.t01	Wine grape	cytosol	88.84	87.01
PGSC0003DMT400011624	Potato	cytosol	88.84	87.01
Solyc09g092380.2.1	Tomato	extracellular	88.63	86.8
Solyc09g092390.2.1	Tomato	extracellular	88.63	86.8
Solyc12g098500.1.1	Tomato	cytosol, extracellular, nucleus, plastid, unclear	88.42	86.6
GSMUA_Achr9P01630_001	Banana	cytosol	77.47	86.59
GSMUA_Achr6P06530_001	Banana	cytosol	77.05	86.12
CDY50106	Canola	cytosol	90.95	85.04
CDY18090	Canola	cytosol	90.95	85.04
GSMUA_Achr8P17490_001	Banana	cytosol, mitochondrion	69.47	84.62
Solyc05g032820.1.1	Tomato	plastid	33.68	72.07
CDY67319	Canola	cytosol	25.89	66.85
CDY40156	Canola	cytosol	11.16	58.89

Protein Annotations

KEGG:00270+3.3.1.1	Gene3D:3.40.50.1480	Gene3D:3.40.50.720	MapMan:7.3.2	GO:A0A078D7Q5	InterPro:Adenosylhomocysteinase
InterPro:Adenosylhomocysteinase-like	InterPro:Ado_hCys_hydrolase_NAD-bd	EnsemblPlants:CDX85127	ProteinID:CDX85127	ProteinID:CDX85127.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004013	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019510	GO:GO:0051287
EnsemblPlantsGene:GSBRNA2T00142658001	HAMAP:MF_00563	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00670	PFAM:PF05221	PIRSF:PIRSF001109
ScanProsite:PS00738	ScanProsite:PS00739	PANTHER:PTHR23420	PANTHER:PTHR23420:SF11	MetaCyc:PWY-5041	InterPro:S-Ado-L-homoCys_hydrolase_CS
SMART:SM00996	SMART:SM00997	SUPFAM:SSF51735	SUPFAM:SSF52283	TIGRFAMs:TIGR00936	UniPathway:UPA00314
UniParc:UPI0004EE4B3B	SEG:seg	:	:	:	:

Description

BnaC07g07790D

Coordinates

chrLK031840:-:1006922..1009249

Molecular Weight (calculated)

52121.1 Da

IEP (calculated)

5.356

GRAVY (calculated)

-0.050

Length

475 amino acids

Sequence
(BLAST)

001: MALLVEKTSS GREYKVKDMS QADFGRLEIE LAEVEMPGLV SCRTEFGPSQ PFKGARITGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLQEYWWC TERALDWGPG GGPDLIVDDG GDATLLIHEG VKAEEIFAKT GQVPDPTSTD NPEFQIVLSI IKDGLQVDPK KYHKMKERLV
201: GVSEETTTGV KRLYQMQETG ALLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVICGY GDVGKGCAAA MKTAGARVIV TEIDPICALQ
301: ALMEGLQVLT LEDVVSEADI FCTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMLGL ETFPGVKRIT IKPQTDRWVF PDTKTGIIVL AEGRLMNLGC
401: ATGHPSFVMS CSFTNQVIAQ LELWNEKSSG KYEKKVYVLP KHLDEKVAAL HLGKLALVGK NMRYWSSYEV DQILV

Best Arabidopsis Sequence Match ( AT4G13940.1 )
(BLAST)

001: MALLVEKTSS GREYKVKDMS QADFGRLELE LAEVEMPGLM ACRTEFGPSQ PFKGARITGS LHMTIQTAVL IETLTALGAE VRWCSCNIFS TQDHAAAAIA
101: RDSAAVFAWK GETLQEYWWC TERALDWGPG GGPDLIVDDG GDATLLIHEG VKAEEIFEKT GQVPDPTSTD NPEFQIVLSI IKEGLQVDPK KYHKMKERLV
201: GVSEETTTGV KRLYQMQQNG TLLFPAINVN DSVTKSKFDN LYGCRHSLPD GLMRATDVMI AGKVAVICGY GDVGKGCAAA MKTAGARVIV TEIDPICALQ
301: ALMEGLQVLT LEDVVSEADI FVTTTGNKDI IMVDHMRKMK NNAIVCNIGH FDNEIDMLGL ETYPGVKRIT IKPQTDRWVF PETKAGIIVL AEGRLMNLGC
401: ATGHPSFVMS CSFTNQVIAQ LELWNEKASG KYEKKVYVLP KHLDEKVALL HLGKLGARLT KLSKDQSDYV SIPIEGPYKP PHYRY

Arabidopsis Description

SAHH1Adenosylhomocysteinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O23255]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.