Factsheet for GSMUA_Achr4P21470_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P22700_001	Banana	cytosol	79.7	96.72
GSMUA_Achr5P02740_001	Banana	cytosol	79.46	96.42
GSMUA_Achr7P01530_001	Banana	cytosol	89.3	94.78
Os12t0624000-02	Rice	extracellular	85.12	90.34
Os12t0623900-01	Rice	extracellular	84.99	90.21
Zm00001d031128_P004	Maize	plasma membrane, plastid	84.01	89.16
KXG24060	Sorghum	cytosol	84.01	89.16
KXG37902	Sorghum	cytosol	83.52	88.76
TraesCS4A01G298700.1	Wheat	cytosol	83.52	88.64
Zm00001d033480_P002	Maize	extracellular	83.39	88.63
HORVU4Hr1G002270.3	Barley	cytosol	83.39	88.51
Solyc10g081510.1.1	Tomato	extracellular	82.53	87.71
TraesCS5D01G031300.2	Wheat	golgi, mitochondrion, nucleus, plasma membrane, unclear	83.03	87.66
TraesCS5B01G022800.4	Wheat	extracellular, golgi, plastid, unclear	83.15	87.56
PGSC0003DMT400072279	Potato	cytosol, extracellular	82.04	87.19
KRG94871	Soybean	cytosol	81.55	86.89
AT5G17920.1	Thale cress	cytosol	81.55	86.67
PGSC0003DMT400022467	Potato	cytosol	81.55	86.67
KRH06666	Soybean	nucleus	81.3	86.63
CDY38470	Canola	cytosol	81.43	86.54
CDY02674	Canola	cytosol	81.43	86.54
CDX85436	Canola	cytosol	81.43	86.54
Bra023645.1-P	Field mustard	cytosol	81.3	86.41
KRH57885	Soybean	cytosol	81.18	86.27
Bra002116.1-P	Field mustard	cytosol	81.18	86.27
KRH04756	Soybean	cytosol, endoplasmic reticulum, nucleus	81.18	86.27
CDY25477	Canola	cytosol	81.18	86.27
CDX78767	Canola	cytosol	81.06	86.14
Bra006429.1-P	Field mustard	cytosol	80.93	86.01
CDX70785	Canola	cytosol	80.81	85.88
KRH04805	Soybean	plastid	44.16	85.68
AT3G03780.2	Thale cress	cytosol	80.32	85.36
CDX74207	Canola	cytosol	80.2	85.23
HORVU5Hr1G006780.7	Barley	cytosol	48.95	85.22
Zm00001d013644_P001	Maize	extracellular	83.39	85.07
CDX92051	Canola	cytosol	79.83	84.84
CDY50662	Canola	cytosol	78.23	84.46
TraesCS5A01G024900.2	Wheat	cytosol	83.39	84.01
KRG89918	Soybean	endoplasmic reticulum	81.43	82.85
KRH17939	Soybean	nucleus	81.67	82.69
TraesCS4B01G014700.2	Wheat	vacuole	83.89	82.57
Bra001090.1-P	Field mustard	cytosol	80.07	82.51
TraesCS4D01G012900.1	Wheat	mitochondrion	83.64	82.32
Solyc01g009180.2.1	Tomato	plastid	82.04	81.64
KRH63013	Soybean	cytosol	11.32	80.7
CDX70955	Canola	mitochondrion	75.52	75.34
CDX88830	Canola	mitochondrion	75.4	75.21
AT5G20980.2	Thale cress	mitochondrion	74.91	75.0
Bra006589.1-P	Field mustard	mitochondrion, plastid	75.03	74.85
KRH04804	Soybean	endoplasmic reticulum	32.6	73.82
KRH04683	Soybean	mitochondrion	24.6	71.68
CDX92419	Canola	plastid	74.91	69.52
CDY16584	Canola	plastid	74.42	64.02
KRH04746	Soybean	plastid	12.05	56.32
VIT_10s0042g00970.t01	Wine grape	cytosol	13.53	40.15

Protein Annotations

KEGG:00270+2.1.1.14	KEGG:00450+2.1.1.14	Gene3D:3.20.20.210	MapMan:4.1.2.2.6.2.1	InterPro:Cbl-indep_Met_Synth_N	InterPro:Cobalamin-indep_Met_synthase
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0003871	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0008652	GO:GO:0009058	GO:GO:0009086	GO:GO:0009987
GO:GO:0016740	GO:GO:0032259	EnsemblPlantsGene:GSMUA_Achr4G21470_001	EnsemblPlants:GSMUA_Achr4P21470_001	EnsemblPlants:GSMUA_Achr4T21470_001	InterPro:IPR038071
UniProt:M0SQW0	HAMAP:MF_00172	InterPro:Met_Synth_C/arc	PFAM:PF01717	PFAM:PF08267	PANTHER:PTHR30519
PANTHER:PTHR30519:SF11	SUPFAM:SSF51726	TIGRFAMs:TIGR01371	UniParc:UPI0002953163	InterPro:UROD/MetE-like_sf	SEG:seg

Description

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Source:GMGC_GENE;Acc:GSMUA_Achr4G21470_001]

Coordinates

chr4:+:21952341..21958805

Molecular Weight (calculated)

90189.5 Da

IEP (calculated)

7.997

GRAVY (calculated)

-0.125

Length

813 amino acids

Sequence
(BLAST)

001: MQRIRSAAAV SPSISTGINL LLRSRLSSSH LCRALLGDRF LLRARRKMAS HIVGYPRMGP KREIKFALES FWDGKSSADD LQKVATDLRC SIWKQMTDVG
101: IKYIPSNTFS YYDQVLDATA MLGAVPERYN YTGGEIGFDI YFSMARGNAS VPAMEMTKWF DTNYHFIVPE LGPNTKFSYS SHKAVSEYKE AKALGIETIP
201: VLIGPVTYLL LSKPAKGVEK SFAPLSLLES ILPIYKEVIA ELKAAGASWI QFDEPTLVLD LESHQLEAFT KAYTELESSL SGLNVLIETY FADVPAEAYK
301: IITALKGVSG FGFDLIRGAK TLDLVKSAGF PAGKYLFAGV VDGRNIWAND LASSFSTLQA LEAIVGKDKL VVSTSCSLMH TAVDLVNETK LDNEIKSWLA
401: FAAQKVVEVN ALAKALAGQK DEAFFSANAA AQSSRKSSPR VTNEEVQKAA AALKGSDHRR ATNVSARLDA QQKKLNLPIL PTTTIGSFPQ TMDLRRVRRE
501: YKANKISEEE YVKAIKEEIN KVVKLQEELD IDVLVHGEPE RNDMVEYFGE QLSGFAFTVN GWVQSYGSRC VKPPIIYGDV SRPKAMTVFW SKMAQSMTAR
601: PMKGMLTGPV TILNWSFVRN DQPRFETCYQ IALAIKKEVE DLEVAGIQVI QIDEAALREG LPLRKSEQAF YLDWAVHSFR ITNCGVQDTT QIHTHMCYSN
701: FNDIIHSIIN MDADVITIEN SRSDEKLLSV FREGVKYGAG IGPGVYDIHS PRIPSTEEIA DRINKMLAVL ETNILWVNPD CGLKTRKYAE VNPALTNMVS
801: AAKVLRTQLA STK

Best Arabidopsis Sequence Match ( AT5G17920.2 )
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKST AEDLQKVSAD LRSSIWKQMS AAGTKFIPSN TFAHYDQVLD TTAMLGAVPP RYGYTGGEIG LDVYFSMARG
101: NASVPAMEMT KWFDTNYHYI VPELGPEVNF SYASHKAVNE YKEAKALGVD TVPVLVGPVS YLLLSKAAKG VDKSFELLSL LPKILPIYKE VITELKAAGA
201: TWIQLDEPVL VMDLEGQKLQ AFTGAYAELE STLSGLNVLV ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTLDLVKA GFPEGKYLFA GVVDGRNIWA
301: NDFAASLSTL QALEGIVGKD KLVVSTSCSL LHTAVDLINE TKLDDEIKSW LAFAAQKVVE VNALAKALAG QKDEALFSAN AAALASRRSS PRVTNEGVQK
401: AAAALKGSDH RRATNVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKVSE EDYVKAIKEE IKKVVDLQEE LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKAMTV FWSAMAQSMT SRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG
601: VIQIDEAALR EGLPLRKSEH AFYLDWAVHS FRITNCGVQD STQIHTHMCY SHFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSSEE IADRVNKMLA VLEQNILWVN PDCGLKTRKY TEVKPALKNM VDAAKLIRSQ LASAK

Arabidopsis Description

MS15-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O50008]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.