CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04756	Soybean	cytosol, endoplasmic reticulum, nucleus	95.82	95.82
KRH04805	Soybean	plastid	50.46	92.12
KRG94871	Soybean	cytosol	90.85	91.09
KRH06666	Soybean	nucleus	90.85	91.09
Solyc10g081510.1.1	Tomato	extracellular	87.45	87.45
PGSC0003DMT400072279	Potato	cytosol, extracellular	87.06	87.06
AT5G17920.1	Thale cress	cytosol	86.67	86.67
AT3G03780.2	Thale cress	cytosol	86.67	86.67
CDY38470	Canola	cytosol	86.54	86.54
Os12t0623900-01	Rice	extracellular	86.41	86.29
CDX74207	Canola	cytosol	86.27	86.27
CDX92051	Canola	cytosol	86.14	86.14
CDY02674	Canola	cytosol	86.14	86.14
CDY25477	Canola	cytosol	86.14	86.14
Bra002116.1-P	Field mustard	cytosol	86.14	86.14
GSMUA_Achr4P22700_001	Banana	cytosol	75.42	86.12
Os12t0624000-02	Rice	extracellular	86.14	86.03
KXG37902	Sorghum	cytosol	86.01	86.01
Zm00001d033480_P002	Maize	extracellular	86.01	86.01
GSMUA_Achr5P02740_001	Banana	cytosol	75.16	85.82
KRH04804	Soybean	endoplasmic reticulum	40.26	85.79
CDY50662	Canola	cytosol	84.44	85.79
KXG24060	Sorghum	cytosol	85.88	85.77
Bra023645.1-P	Field mustard	cytosol	85.75	85.75
CDX78767	Canola	cytosol	85.75	85.75
CDX85436	Canola	cytosol	85.75	85.75
Bra006429.1-P	Field mustard	cytosol	85.62	85.62
Zm00001d031128_P004	Maize	plasma membrane, plastid	85.62	85.51
CDX70785	Canola	cytosol	85.49	85.49
TraesCS4A01G298700.1	Wheat	cytosol	85.36	85.25
HORVU4Hr1G002270.3	Barley	cytosol	85.23	85.12
GSMUA_Achr7P01530_001	Banana	cytosol	85.23	85.12
Bra001090.1-P	Field mustard	cytosol	86.01	83.4
TraesCS5D01G031300.2	Wheat	golgi, mitochondrion, nucleus, plasma membrane, unclear	83.66	83.12
TraesCS5B01G022800.4	Wheat	extracellular, golgi, plastid, unclear	83.66	82.9
KRG89918	Soybean	endoplasmic reticulum	86.14	82.48
KRH17939	Soybean	nucleus	86.27	82.19
Zm00001d013644_P001	Maize	extracellular	85.23	81.81
GSMUA_Achr4P21470_001	Banana	mitochondrion	86.27	81.18
HORVU5Hr1G006780.7	Barley	cytosol	49.41	80.94
KRH63013	Soybean	cytosol	12.03	80.7
TraesCS5A01G024900.2	Wheat	cytosol	83.66	79.31
TraesCS4B01G014700.2	Wheat	vacuole	85.23	78.93
TraesCS4D01G012900.1	Wheat	mitochondrion	84.97	78.69
KRH04683	Soybean	mitochondrion	25.1	68.82
KRH04746	Soybean	plastid	13.46	59.2

Protein Annotations

KEGG:00270+2.1.1.14	KEGG:00450+2.1.1.14	EntrezGene:100811317	Gene3D:3.20.20.210	MapMan:4.1.2.2.6.2.1	EMBL:ACUP02003068
InterPro:Cbl-indep_Met_Synth_N	InterPro:Cobalamin-indep_Met_synthase	EnsemblPlantsGene:GLYMA_05G090100	GO:GO:0003674	GO:GO:0003824	GO:GO:0003871
GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0008652	GO:GO:0008705
GO:GO:0009058	GO:GO:0009086	GO:GO:0009987	GO:GO:0016740	GO:GO:0032259	GO:GO:0050667
InterPro:IPR038071	UniProt:K7KNT9	ProteinID:KRH57884.1	EnsemblPlants:KRH57885	ProteinID:KRH57885	ProteinID:KRH57885.1
HAMAP:MF_00172	InterPro:Met_Synth_C/arc	PFAM:PF01717	PFAM:PF08267	PIRSF:PIRSF000382	PANTHER:PTHR30519
PANTHER:PTHR30519:SF11	MetaCyc:PWY-5041	MetaCyc:PWY-6151	MetaCyc:PWY-6936	MetaCyc:PWY-702	SUPFAM:SSF51726
TIGRFAMs:TIGR01371	UniParc:UPI000233AA1A	InterPro:UROD/MetE-like_sf	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:-:20035333..20040368

Molecular Weight (calculated)

84701.2 Da

IEP (calculated)

5.751

GRAVY (calculated)

-0.176

Length

765 amino acids

Sequence
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWEGKSS ADDLQKVAAD LRASIWKQMT DAGIKYIPSN TFSYYDQMLD TTAMLGAVPP RYGLNNGEIE FDTYFSMARG
101: NASVPAMEMT KWFDTNYHFI VPELGPDVNF TYASHKAVNE YKEAKALGVD TVPVLIGPVS YLVLSKPAKG VDKSFCLLSL LPKVLAIYKE VVADLKEAGA
201: SWVQFDEPIF VLDLDSQTLQ AFSTAYAELE STLSGLNVLI ETYFADITAE AYQTLTALNG VTAFGFDLVR GTKTLDLIKG GFPSGKYMFA GVVDGRNIWA
301: NNLAASLDTL NSLEGIVGKD KLVVSTSCSL LHTAVDLVNE TKLDNEIKSW LAFAAQKIVE VNALAKALSG QKDEAFFSSN AAAQASRKSS PRVTNEAVQK
401: AAAALKGSDH RRATNVSARL DAQQKKFNLP ILPTTTIGSF PQTVELRRVR REYKANKISE EEYVSSIKEE IRKVVELQEN LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT VNGWVQSYGS RCVKPPIIYG DVSRPKPMTV FWSSTAQSMT KRPMKGMLTG PVTILNWSFV RNDQPRSETT YQIALAIKDE VEDLEKAGIT
601: VIQIDEAALR EGLPLRKSEQ ANYLDWAVHS FRITNIGVQD TTQIHTHMCY SNFNDIIHSI IDMDADVITI ENSRSDEKLL SVFRDGVKYG AGIGPGVYDI
701: HSPRIPPTDE IADRINKMLA VLEKNILWVN PDCGLKTRKY PEVNPALTNM VAATKLIRNQ LASGK

Best Arabidopsis Sequence Match ( AT3G03780.2 )
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKSS ADDLQKVSAD LRSDIWKQMS AAGIKYIPSN TFSHYDQVLD TTAMLGAVPS RYGFTSGEIG LDVYFSMARG
101: NASVPAMEMT KWFDTNYHYI VPELGPEVKF SYASHKAVNE YKEAKALGVE TVPVLVGPVS YLLLSKLAKG VDKSFDLLSL LPKILPVYKE VIAELKAAGA
201: SWIQLDEPLF VMDLEGHKLQ AFSGAYAELE STLSGLNVLV ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTIDLIKS GFPQGKYLFA GVVDGRNIWA
301: NDLAASLITL QSLEGVVGKD KLVVSTSCSL LHTAVDLINE TKLDAEIKSW LAFAAQKVVE VDALAKALAG QTNESFFTAN ADALSSRRSS PRVTNESVQK
401: AAAALKGSDH RRTTEVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKISE EDYVKAIKEE IKKVVDIQED LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKPMTV FWSSTAQSMT KRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG
601: VIQIDEAALR EGLPLRKAEH SFYLDWAVHS FRITNCGVQD STQIHTHMCY SNFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSTDE IADRINKMLA VLEQNILWVN PDCGLKTRKY TEVKPALKAM VDAAKLIRSQ LGSAK

Arabidopsis Description

MS25-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.