CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92051	Canola	cytosol	99.22	99.22
Bra001090.1-P	Field mustard	cytosol	99.22	96.2
AT3G03780.2	Thale cress	cytosol	95.82	95.82
CDY50662	Canola	cytosol	93.86	95.35
CDX85436	Canola	cytosol	92.29	92.29
CDY02674	Canola	cytosol	92.29	92.29
CDX78767	Canola	cytosol	92.16	92.16
CDY38470	Canola	cytosol	92.03	92.03
CDY25477	Canola	cytosol	92.03	92.03
CDX70785	Canola	cytosol	91.9	91.9
Solyc10g081510.1.1	Tomato	extracellular	88.63	88.63
PGSC0003DMT400072279	Potato	cytosol, extracellular	88.37	88.37
Os12t0623900-01	Rice	extracellular	87.32	87.21
Zm00001d031128_P004	Maize	plasma membrane, plastid	87.19	87.08
KXG24060	Sorghum	cytosol	87.06	86.95
Zm00001d033480_P002	Maize	extracellular	86.93	86.93
KXG37902	Sorghum	cytosol	86.93	86.93
HORVU4Hr1G002270.3	Barley	cytosol	86.93	86.81
Os12t0624000-02	Rice	extracellular	86.93	86.81
TraesCS4A01G298700.1	Wheat	cytosol	86.8	86.68
KRH57885	Soybean	cytosol	86.27	86.27
KRG94871	Soybean	cytosol	86.01	86.24
KRH06666	Soybean	nucleus	86.01	86.24
KRH04756	Soybean	cytosol, endoplasmic reticulum, nucleus	86.14	86.14
GSMUA_Achr5P02740_001	Banana	cytosol	75.16	85.82
GSMUA_Achr4P22700_001	Banana	cytosol	75.16	85.82
TraesCS5D01G031300.2	Wheat	golgi, mitochondrion, nucleus, plasma membrane, unclear	85.88	85.32
TraesCS5B01G022800.4	Wheat	extracellular, golgi, plastid, unclear	85.88	85.1
GSMUA_Achr7P01530_001	Banana	cytosol	84.97	84.86
KRH04805	Soybean	plastid	45.62	83.29
Zm00001d013644_P001	Maize	extracellular	86.27	82.81
HORVU5Hr1G006780.7	Barley	cytosol	50.2	82.23
TraesCS5A01G024900.2	Wheat	cytosol	85.88	81.41
TraesCS4B01G014700.2	Wheat	vacuole	86.67	80.27
GSMUA_Achr4P21470_001	Banana	mitochondrion	85.23	80.2
TraesCS4D01G012900.1	Wheat	mitochondrion	86.54	80.15
KRH63013	Soybean	cytosol	11.76	78.95
KRH04804	Soybean	endoplasmic reticulum	36.21	77.16
CDX88830	Canola	mitochondrion	79.48	74.6
CDX70955	Canola	mitochondrion	79.35	74.48
CDX92419	Canola	plastid	78.43	68.49
CDY16584	Canola	plastid	78.04	63.17
KRH04746	Soybean	plastid	13.2	58.05

Protein Annotations

KEGG:00270+2.1.1.14	KEGG:00450+2.1.1.14	Gene3D:3.20.20.210	MapMan:4.1.2.2.6.2.1	GO:A0A078CBH7	EnsemblPlants:CDX74207
ProteinID:CDX74207	ProteinID:CDX74207.1	InterPro:Cbl-indep_Met_Synth_N	InterPro:Cobalamin-indep_Met_synthase	GO:GO:0003674	GO:GO:0003824
GO:GO:0003871	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0008652
GO:GO:0009058	GO:GO:0009086	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00111978001	InterPro:IPR038071
HAMAP:MF_00172	InterPro:Met_Synth_C/arc	PFAM:PF01717	PFAM:PF08267	PIRSF:PIRSF000382	PANTHER:PTHR30519
PANTHER:PTHR30519:SF11	MetaCyc:PWY-5041	MetaCyc:PWY-6151	MetaCyc:PWY-6936	MetaCyc:PWY-702	SUPFAM:SSF51726
TIGRFAMs:TIGR01371	UniPathway:UPA00051	UniParc:UPI0004EF360F	InterPro:UROD/MetE-like_sf	SEG:seg	:

Description

BnaA03g28400D

Coordinates

chrLK031800:-:1774898..1779651

Molecular Weight (calculated)

84921.8 Da

IEP (calculated)

6.578

GRAVY (calculated)

-0.169

Length

765 amino acids

Sequence
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKTT AEDLKKVSAD LRSDIWKQMS AAGIKYIPSN TFAYYDQVLD TTAMLGAVPP RYGWNSGEIG FDVYFSMARG
101: NASVPAMEMT KWFDTNYHYI VPELGPEVKF SYASHKAVNE YKEAKALGVE TVPVLVGPVS YLLLSKLAKG VDKSFDLLSL LPKILPIYKE VIAELKGAGA
201: TWIQFDEPLF VMDLEGHKLQ AFSGAYAELE STLSGLNVLV ETYFADVPAE AYKTLTSLKG VTAFGFDLIR GTKTIDLIKS SFPEGKYLFA GVVDGRNIWA
301: NDLAASLITL QSLEGVVGKD KLVVSTSCSL LHTAVDLVNE TKLDAEIKSW LAFAAQKVVE VDALAKALAG QTNQSFFSAN AEALSSRRSS PRVTNQSVQK
401: AAADLKGSDH RRATEVTARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKISE EDYVKAIKEE IKKVVDIQEE LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPIIYG DVSRPKPMTV FWSSTAQSMT KRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG
601: VIQIDEAALR EGLPLRKAEH SFYLDWAVHS FRITNCGVQD STQIHTHMCY SHFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSTDE IADRVNKMLA VLEQNILWVN PDCGLKTRKY TEVKPALKNM VDAAKLIRSQ LASAK

Best Arabidopsis Sequence Match ( AT3G03780.2 )
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKSS ADDLQKVSAD LRSDIWKQMS AAGIKYIPSN TFSHYDQVLD TTAMLGAVPS RYGFTSGEIG LDVYFSMARG
101: NASVPAMEMT KWFDTNYHYI VPELGPEVKF SYASHKAVNE YKEAKALGVE TVPVLVGPVS YLLLSKLAKG VDKSFDLLSL LPKILPVYKE VIAELKAAGA
201: SWIQLDEPLF VMDLEGHKLQ AFSGAYAELE STLSGLNVLV ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTIDLIKS GFPQGKYLFA GVVDGRNIWA
301: NDLAASLITL QSLEGVVGKD KLVVSTSCSL LHTAVDLINE TKLDAEIKSW LAFAAQKVVE VDALAKALAG QTNESFFTAN ADALSSRRSS PRVTNESVQK
401: AAAALKGSDH RRTTEVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKISE EDYVKAIKEE IKKVVDIQED LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKPMTV FWSSTAQSMT KRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG
601: VIQIDEAALR EGLPLRKAEH SFYLDWAVHS FRITNCGVQD STQIHTHMCY SNFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSTDE IADRINKMLA VLEQNILWVN PDCGLKTRKY TEVKPALKAM VDAAKLIRSQ LGSAK

Arabidopsis Description

MS25-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.