CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92419	Canola	plastid	86.98	93.84
CDX88830	Canola	mitochondrion	75.24	87.24
AT5G20980.2	Thale cress	mitochondrion	74.71	86.95
CDX70955	Canola	mitochondrion	74.71	86.63
GSMUA_Achr4P22700_001	Banana	cytosol	56.08	79.1
CDY38470	Canola	cytosol	63.7	78.69
GSMUA_Achr5P02740_001	Banana	cytosol	55.66	78.51
PGSC0003DMT400022467	Potato	cytosol	63.49	78.43
CDY25477	Canola	cytosol	63.49	78.43
Os12t0624000-02	Rice	extracellular	63.49	78.33
CDY02674	Canola	cytosol	63.28	78.17
CDX70785	Canola	cytosol	63.17	78.04
CDX78767	Canola	cytosol	63.17	78.04
CDX74207	Canola	cytosol	63.17	78.04
CDX85436	Canola	cytosol	63.07	77.91
Os12t0623900-01	Rice	extracellular	63.07	77.81
GSMUA_Achr7P01530_001	Banana	cytosol	62.96	77.68
CDX92051	Canola	cytosol	62.86	77.65
VIT_06s0009g01080.t01	Wine grape	plastid	66.03	77.61
HORVU4Hr1G002270.3	Barley	cytosol	62.86	77.55
TraesCS4A01G298700.1	Wheat	cytosol	62.86	77.55
KXG24060	Sorghum	cytosol	62.75	77.42
Zm00001d031128_P004	Maize	plasma membrane, plastid	62.65	77.28
Zm00001d033480_P002	Maize	extracellular	62.54	77.25
KXG37902	Sorghum	cytosol	62.54	77.25
KRG89918	Soybean	endoplasmic reticulum	65.19	77.1
KRH17939	Soybean	nucleus	65.19	76.71
CDY50662	Canola	cytosol	60.85	76.36
TraesCS5D01G031300.2	Wheat	golgi, mitochondrion, nucleus, plasma membrane, unclear	62.01	76.1
TraesCS5B01G022800.4	Wheat	extracellular, golgi, plastid, unclear	61.8	75.65
Zm00001d013644_P001	Maize	extracellular	62.96	74.66
Solyc01g009180.2.1	Tomato	plastid	64.34	74.42
GSMUA_Achr4P21470_001	Banana	mitochondrion	64.02	74.42
HORVU5Hr1G006780.7	Barley	cytosol	36.4	73.66
TraesCS5A01G024900.2	Wheat	cytosol	62.54	73.23
TraesCS4B01G014700.2	Wheat	vacuole	63.39	72.52
TraesCS4D01G012900.1	Wheat	mitochondrion	63.28	72.4
KRH04683	Soybean	mitochondrion	20.53	69.53

Protein Annotations

KEGG:00270+2.1.1.14	KEGG:00450+2.1.1.14	Gene3D:3.20.20.210	MapMan:4.1.2.2.6.2.1	GO:A0A078FUC7	UniProt:A0A078FUC7
EnsemblPlants:CDY16584	ProteinID:CDY16584	ProteinID:CDY16584.1	InterPro:Cbl-indep_Met_Synth_N	InterPro:Cobalamin-indep_Met_synthase	GO:GO:0003674
GO:GO:0003824	GO:GO:0003871	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0008652	GO:GO:0009058	GO:GO:0009086	GO:GO:0009987	GO:GO:0016740	GO:GO:0032259
EnsemblPlantsGene:GSBRNA2T00094390001	InterPro:IPR038071	HAMAP:MF_00172	InterPro:Met_Synth_C/arc	PFAM:PF01717	PFAM:PF08267
PANTHER:PTHR30519	PANTHER:PTHR30519:SF11	MetaCyc:PWY-5041	MetaCyc:PWY-6151	MetaCyc:PWY-6936	MetaCyc:PWY-702
SUPFAM:SSF51726	TIGRFAMs:TIGR01371	UniPathway:UPA00051	UniParc:UPI0004EE409D	InterPro:UROD/MetE-like_sf	SEG:seg

Description

BnaC09g36890DBnaC09g36890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUC7]

Coordinates

chrLK032065:-:439952..444031

Molecular Weight (calculated)

106130.0 Da

IEP (calculated)

9.167

GRAVY (calculated)

-0.273

Length

945 amino acids

Sequence
(BLAST)

001: MAVGSYLIPF SFFSVSRSRH LRRSHPLQQE LERLNIDNLH TWEPKRSSRV CEGAVTSVEA RPEADQRRQE REREREKHPK HMAEATAPPA DTWEQTTQKM
101: VAVLVLTETS QLLWSMNQSP IVFVNNRSSL KKGKTIRMGQ RALQRVPPSL PSRTPSLPPP SSSSPSLRCA PSSRRPLRPR AMSSHIVGYP RIGPKRELKF
201: ALESFWDGKT GAEDLQNVAA DLRRSIWKHM AGVGIKYIPS NTFSYYDQML DTTAMLGAVP SRYGWESGEV GFDVYFSMAR GNDSVPAMEM TKWFDTNYHY
301: IVPELGPSVK FSYASHKAVE EFKEAKALGI DTVPVLIGPM TYLLLSKPAK DVDKSFCLLS LIDKILPVYK EVLTDLKSAG ARWIQFDEPI LVMDLDTNQL
401: QAFSDAYSHM ESSLAGLNVL IATYFADVPA EAYKALTSLK CVTGFGFDLV RGLETLDLIK VDFPRGKLLF AGVVDGRNIW ANDLSASLKT LQTLEDIVGK
501: EKVVVSTSCS LLHTAVDLLN EIKLDKELKS WLAFAAQKVV EVYALARSFS GVKDEAMFAS NSMRQASRRS SPRVTNATIQ HNVAAVMKSD HRRSTKVSAR
601: LQAQQKKLNL PPLPTTTIGS FPQTADLRRI RKEFKARKIS EIDYVQAVKV EFEKVVKLQE ELGIDVLVHG EAERNDMVEF FGEQLSGFAF TSNGWVQSYG
701: SRCVKPPIIY GDVSRPKAMT VFWSSMAQKM TERPMKGMLT GPVTILNWSF VRNDQPRYET CFQIALAIKD EVKDLEKAGI TVIQIDEAAL REGLPLRRSE
801: QELYLDWAVH AFRITNCDVR DTTQIHTHMC YSNFNDIINS IINMDADVIT IENSRSDEKL LSVFHEGVKY GAGIGPGVYD IHSPRIPSSE EIAERINKML
901: AVLDSKVLWV NPDCGLKTRK YSEVKSALSN MVAATKLIRS QLNKS

Best Arabidopsis Sequence Match ( AT5G20980.1 )
(BLAST)

001: MGQLALQRLQ PLASLPRRPP SLPPPSSATP SLPCATASRR PRFYVARAMS SHIVGYPRIG PKRELKFALE SFWDGKTNVD DLQNVAANLR KSIWKHMAHA
101: GIKYIPSNTF SYYDQMLDTT AMLGAVPSRY GWESGEIGFD VYFSMARGNA SAHAMEMTKW FDTNYHYIVP ELGPDVNFSY ASHKAVVEFK EAKALGIDTV
201: PVLIGPMTYL LLSKPAKGVE KSFCLLSLID KILPVYKEVL ADLKSAGARW IQFDEPILVM DLDTSQLQAF SDAYSHMESS LAGLNVLIAT YFADVPAEAY
301: KTLMSLKCVT GFGFDLVRGL ETLDLIKMNF PRGKLLFAGV VDGRNIWAND LSASLKTLQT LEDIVGKEKV VVSTSCSLLH TAVDLVNEMK LDKELKSWLA
401: FAAQKVVEVN ALAKSFSGAK DEALFSSNSM RQASRRSSPR VTNAAVQQDV DAVKKSDHHR STEVSVRLQA QQKKLNLPAL PTTTIGSFPQ TTDLRRIRRE
501: FKAKKISEVD YVQTIKEEYE KVIKLQEELG IDVLVHGEAE RNDMVEFFGE QLSGFAFTSN GWVQSYGSRC VKPPIIYGDI TRPKAMTVFW SSMAQKMTQR
601: PMKGMLTGPV TILNWSFVRN DQPRHETCFQ IALAIKDEVE DLEKAGVTVI QIDEAALREG LPLRKSEQKF YLDWAVHAFR ITNSGVQDST QIHTHMCYSN
701: FNDIIHSIID MDADVITIEN SRSDEKLLSV FHEGVKYGAG IGPGVYDIHS PRIPSTEEIA ERINKMLAVL DSKVLWVNPD CGLKTRNYSE VKSALSNMVA
801: AAKLIRSQLN KS

Arabidopsis Description

MS35-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WNZ5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.