CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033480_P002	Maize	extracellular	98.82	98.82
HORVU4Hr1G002270.3	Barley	cytosol	95.03	94.91
TraesCS4A01G298700.1	Wheat	cytosol	94.64	94.52
Zm00001d013644_P001	Maize	extracellular	98.17	94.23
KXG24060	Sorghum	cytosol	93.59	93.47
GSMUA_Achr5P02740_001	Banana	cytosol	78.43	89.55
GSMUA_Achr4P22700_001	Banana	cytosol	78.04	89.1
GSMUA_Achr7P01530_001	Banana	cytosol	88.76	88.64
Solyc10g081510.1.1	Tomato	extracellular	87.97	87.97
TraesCS4B01G014700.2	Wheat	vacuole	94.64	87.65
PGSC0003DMT400072279	Potato	cytosol, extracellular	87.45	87.45
CDX85436	Canola	cytosol	87.45	87.45
TraesCS4D01G012900.1	Wheat	mitochondrion	94.38	87.41
CDY02674	Canola	cytosol	87.32	87.32
Bra023645.1-P	Field mustard	cytosol	87.32	87.32
CDY38470	Canola	cytosol	87.32	87.32
Bra002116.1-P	Field mustard	cytosol	87.19	87.19
CDY25477	Canola	cytosol	87.19	87.19
AT5G17920.1	Thale cress	cytosol	87.19	87.19
CDX78767	Canola	cytosol	87.06	87.06
KRG94871	Soybean	cytosol	86.8	87.02
PGSC0003DMT400022467	Potato	cytosol	86.93	86.93
CDX74207	Canola	cytosol	86.93	86.93
Bra006429.1-P	Field mustard	cytosol	86.93	86.93
CDX70785	Canola	cytosol	86.8	86.8
AT3G03780.2	Thale cress	cytosol	86.8	86.8
KRH06666	Soybean	nucleus	86.54	86.76
CDX92051	Canola	cytosol	86.41	86.41
KRH57885	Soybean	cytosol	86.01	86.01
KRH04756	Soybean	cytosol, endoplasmic reticulum, nucleus	85.75	85.75
CDY50662	Canola	cytosol	83.79	85.13
KRH04805	Soybean	plastid	46.14	84.25
Bra001090.1-P	Field mustard	cytosol	86.54	83.9
GSMUA_Achr4P21470_001	Banana	mitochondrion	88.76	83.52
KRG89918	Soybean	endoplasmic reticulum	86.41	82.73
KRH17939	Soybean	nucleus	86.67	82.57
Solyc01g009180.2.1	Tomato	plastid	87.32	81.76
KRH63013	Soybean	cytosol	12.03	80.7
KRH04804	Soybean	endoplasmic reticulum	34.9	74.37
AT5G20980.2	Thale cress	mitochondrion	77.78	73.28
CDX70955	Canola	mitochondrion	77.91	73.13
Bra006589.1-P	Field mustard	mitochondrion, plastid	77.78	73.01
CDX88830	Canola	mitochondrion	77.78	73.01
KRH04683	Soybean	mitochondrion	25.49	69.89
CDX92419	Canola	plastid	77.65	67.81
CDY16584	Canola	plastid	77.25	62.54
KRH04746	Soybean	plastid	13.2	58.05
VIT_10s0042g00970.t01	Wine grape	cytosol	14.77	41.24

Protein Annotations

KEGG:00270+2.1.1.14	KEGG:00450+2.1.1.14	Gene3D:3.20.20.210	MapMan:4.1.2.2.6.2.1	UniProt:A0A1B6QJ05	InterPro:Cbl-indep_Met_Synth_N
InterPro:Cobalamin-indep_Met_synthase	GO:GO:0003674	GO:GO:0003824	GO:GO:0003871	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0008652	GO:GO:0009058	GO:GO:0009086	GO:GO:0009987
GO:GO:0016740	GO:GO:0032259	InterPro:IPR038071	EnsemblPlants:KXG37902	ProteinID:KXG37902	ProteinID:KXG37902.1
HAMAP:MF_00172	InterPro:Met_Synth_C/arc	PFAM:PF01717	PFAM:PF08267	PIRSF:PIRSF000382	PANTHER:PTHR30519
PANTHER:PTHR30519:SF11	MetaCyc:PWY-5041	MetaCyc:PWY-6151	MetaCyc:PWY-6936	MetaCyc:PWY-702	EnsemblPlantsGene:SORBI_3001G148900
SUPFAM:SSF51726	TIGRFAMs:TIGR01371	UniParc:UPI000220700D	InterPro:UROD/MetE-like_sf	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:11972929..11978373

Molecular Weight (calculated)

84516.9 Da

IEP (calculated)

6.107

GRAVY (calculated)

-0.154

Length

765 amino acids

Sequence
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKSS AEDLEKVATD LRSSIWKQMS EAGIKYIPSN TFSYYDQVLD TTAMLGAVPE RYSWTGGEIG LSTYFSMARG
101: NATVPAMEMT KWFDTNYHFI VPELGPSTKF TYASHKAVSE YKEAKALGID TVPVLVGPVS YLLLSKPAKG VEKSFSLLSL LGSILPIYKE VVAELKAAGA
201: SWIQFDEPTL VKDLDAHELA AFSSAYAELE SAFSGLNVLI ETYFADIPAE SYKTLTSLSG VTAYGFDLIR GAKTLDLIRS SFPSGKYLFA GVVDGRNIWA
301: DDLAASLSTL QSLEAVAGKD KLVVSTSCSL MHTAVDLVNE TKLDDEIKSW LAFAAQKVVE VNALAKALAG QKDEAYFAAN AAAQASRRSS PRVTNEEVQK
401: AAAALKGSDH RRATTVSSRL DAQQKKLNLP VLPTTTIGSF PQTPELRRVR REYKAKKISE EEYISAIKEE ISKVVKIQEE LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPIIYG DVSRPNPMTV FWSKTAQSMT ARPMKGMLTG PVTILNWSFV RNDQPRFETC YQIALAIKKE VEDLEAAGIQ
601: VIQIDEAALR EGLPLRKSEH AFYLDWAVHS FRITNCGVQD TTQIHTHMCY SNFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPTTEE IADRVNKMLA VLDTNILWVN PDCGLKTRKY TEVKPALTNM VSATKLIRTQ LASAK

Best Arabidopsis Sequence Match ( AT5G17920.2 )
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKST AEDLQKVSAD LRSSIWKQMS AAGTKFIPSN TFAHYDQVLD TTAMLGAVPP RYGYTGGEIG LDVYFSMARG
101: NASVPAMEMT KWFDTNYHYI VPELGPEVNF SYASHKAVNE YKEAKALGVD TVPVLVGPVS YLLLSKAAKG VDKSFELLSL LPKILPIYKE VITELKAAGA
201: TWIQLDEPVL VMDLEGQKLQ AFTGAYAELE STLSGLNVLV ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTLDLVKA GFPEGKYLFA GVVDGRNIWA
301: NDFAASLSTL QALEGIVGKD KLVVSTSCSL LHTAVDLINE TKLDDEIKSW LAFAAQKVVE VNALAKALAG QKDEALFSAN AAALASRRSS PRVTNEGVQK
401: AAAALKGSDH RRATNVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKVSE EDYVKAIKEE IKKVVDLQEE LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKAMTV FWSAMAQSMT SRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG
601: VIQIDEAALR EGLPLRKSEH AFYLDWAVHS FRITNCGVQD STQIHTHMCY SHFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSSEE IADRVNKMLA VLEQNILWVN PDCGLKTRKY TEVKPALKNM VDAAKLIRSQ LASAK

Arabidopsis Description

MS15-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O50008]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.