CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
endoplasmic reticulum 2
nucleus 1
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus, plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63013	Soybean	cytosol	40.23	61.4
KRH04805	Soybean	plastid	48.85	20.29
HORVU5Hr1G006780.7	Barley	cytosol	48.28	17.99
GSMUA_Achr4P22700_001	Banana	cytosol	54.6	14.18
KRG94871	Soybean	cytosol	62.07	14.15
GSMUA_Achr5P02740_001	Banana	cytosol	54.02	14.03
KRH06666	Soybean	nucleus	60.92	13.89
CDY50662	Canola	cytosol	58.62	13.55
KRH57885	Soybean	cytosol	59.2	13.46
TraesCS4A01G298700.1	Wheat	cytosol	59.2	13.45
Os12t0624000-02	Rice	extracellular	59.2	13.45
PGSC0003DMT400072279	Potato	cytosol, extracellular	58.62	13.33
HORVU4Hr1G002270.3	Barley	cytosol	58.62	13.32
KXG37902	Sorghum	cytosol	58.05	13.2
KRH04756	Soybean	cytosol, endoplasmic reticulum, nucleus	58.05	13.2
CDY02674	Canola	cytosol	58.05	13.2
CDX92051	Canola	cytosol	58.05	13.2
CDX85436	Canola	cytosol	58.05	13.2
CDX74207	Canola	cytosol	58.05	13.2
Bra023645.1-P	Field mustard	cytosol	58.05	13.2
AT5G17920.1	Thale cress	cytosol	58.05	13.2
Os12t0623900-01	Rice	extracellular	58.05	13.19
Zm00001d033480_P002	Maize	extracellular	57.47	13.07
AT3G03780.2	Thale cress	cytosol	57.47	13.07
CDY38470	Canola	cytosol	57.47	13.07
GSMUA_Achr7P01530_001	Banana	cytosol	57.47	13.05
CDY25477	Canola	cytosol	56.9	12.94
CDX78767	Canola	cytosol	56.9	12.94
CDX70785	Canola	cytosol	56.9	12.94
Solyc10g081510.1.1	Tomato	extracellular	56.9	12.94
Bra002116.1-P	Field mustard	cytosol	56.9	12.94
Zm00001d031128_P004	Maize	plasma membrane, plastid	56.9	12.92
KXG24060	Sorghum	cytosol	56.9	12.92
TraesCS5D01G031300.2	Wheat	golgi, mitochondrion, nucleus, plasma membrane, unclear	56.9	12.86
KRH17939	Soybean	nucleus	59.2	12.83
TraesCS5B01G022800.4	Wheat	extracellular, golgi, plastid, unclear	56.9	12.82
Bra006429.1-P	Field mustard	cytosol	56.32	12.81
KRG89918	Soybean	endoplasmic reticulum	58.62	12.77
Bra001090.1-P	Field mustard	cytosol	57.47	12.67
Zm00001d013644_P001	Maize	extracellular	57.47	12.55
TraesCS4D01G012900.1	Wheat	mitochondrion	59.2	12.47
TraesCS4B01G014700.2	Wheat	vacuole	59.2	12.47
TraesCS5A01G024900.2	Wheat	cytosol	56.9	12.27
GSMUA_Achr4P21470_001	Banana	mitochondrion	56.32	12.05
KRH04804	Soybean	endoplasmic reticulum	11.49	5.57
KRH04683	Soybean	mitochondrion	6.32	3.94

Protein Annotations

KEGG:00270+2.1.1.14	KEGG:00450+2.1.1.14	Gene3D:3.20.20.210	MapMan:35.1	EMBL:ACUP02010533	EnsemblPlantsGene:GLYMA_17G183900
GO:GO:0003674	GO:GO:0003824	GO:GO:0003871	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0008705	GO:GO:0009058	GO:GO:0009086	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0032259	GO:GO:0050667	InterPro:IPR038071	UniProt:K7MME4
EnsemblPlants:KRH04746	ProteinID:KRH04746	ProteinID:KRH04746.1	InterPro:Met_Synth_C/arc	PFAM:PF01717	PANTHER:PTHR30519
PANTHER:PTHR30519:SF11	MetaCyc:PWY-5041	MetaCyc:PWY-6151	MetaCyc:PWY-6936	MetaCyc:PWY-702	SUPFAM:SSF51726
TMHMM:TMhelix	UniParc:UPI0002953576	InterPro:UROD/MetE-like_sf	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr17:+:23290764..23291372

Molecular Weight (calculated)

19078.6 Da

IEP (calculated)

10.648

GRAVY (calculated)

0.152

Length

174 amino acids

Sequence
(BLAST)

001: MRTLGPSLAS LAQSSWSLLS NALGGRIASL TLSLSLCLLT FLRFCALALN NHKIRIVTGI DLNNRYVPSG INNFVEASIT IKNSRSDEKL LPVFHEGVKY
101: GAGIGPGVYD IHFPRIPPTI ETANKINKML AVLEKNILWV KTDCGLKTRK YTKVKSALTN MVVAAKLIRN ELAK

Best Arabidopsis Sequence Match ( AT5G17920.1 )
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKST AEDLQKVSAD LRSSIWKQMS AAGTKFIPSN TFAHYDQVLD TTAMLGAVPP RYGYTGGEIG LDVYFSMARG
101: NASVPAMEMT KWFDTNYHYI VPELGPEVNF SYASHKAVNE YKEAKALGVD TVPVLVGPVS YLLLSKAAKG VDKSFELLSL LPKILPIYKE VITELKAAGA
201: TWIQLDEPVL VMDLEGQKLQ AFTGAYAELE STLSGLNVLV ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTLDLVKA GFPEGKYLFA GVVDGRNIWA
301: NDFAASLSTL QALEGIVGKD KLVVSTSCSL LHTAVDLINE TKLDDEIKSW LAFAAQKVVE VNALAKALAG QKDEALFSAN AAALASRRSS PRVTNEGVQK
401: AAAALKGSDH RRATNVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKVSE EDYVKAIKEE IKKVVDLQEE LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKAMTV FWSAMAQSMT SRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG
601: VIQIDEAALR EGLPLRKSEH AFYLDWAVHS FRITNCGVQD STQIHTHMCY SHFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSSEE IADRVNKMLA VLEQNILWVN PDCGLKTRKY TEVKPALKNM VDAAKLIRSQ LASAK

Arabidopsis Description

MS15-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O50008]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.