Factsheet for HORVU5Hr1G006780.7

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04805	Soybean	plastid	71.31	79.47
KRH63013	Soybean	cytosol	18.2	74.56
GSMUA_Achr4P22700_001	Banana	cytosol	86.08	60.0
GSMUA_Achr5P02740_001	Banana	cytosol	84.8	59.1
TraesCS5D01G031300.2	Wheat	golgi, mitochondrion, nucleus, plasma membrane, unclear	93.15	56.49
TraesCS5B01G022800.4	Wheat	extracellular, golgi, plastid, unclear	92.72	56.09
TraesCS5A01G024900.2	Wheat	cytosol	93.15	53.9
HORVU4Hr1G002270.3	Barley	cytosol	88.01	53.66
GSMUA_Achr7P01530_001	Banana	cytosol	85.44	52.09
Bra002116.1-P	Field mustard	cytosol	84.37	51.5
CDY38470	Canola	cytosol	84.37	51.5
CDY25477	Canola	cytosol	84.37	51.5
AT5G17920.1	Thale cress	cytosol	84.37	51.5
CDY02674	Canola	cytosol	84.37	51.5
CDX78767	Canola	cytosol	84.15	51.37
Bra006429.1-P	Field mustard	cytosol	83.94	51.24
CDX85436	Canola	cytosol	83.94	51.24
CDX70785	Canola	cytosol	83.94	51.24
Bra023645.1-P	Field mustard	cytosol	83.94	51.24
CDY50662	Canola	cytosol	82.01	50.86
Solyc10g081510.1.1	Tomato	extracellular	83.3	50.85
KRG94871	Soybean	cytosol	82.01	50.2
PGSC0003DMT400072279	Potato	cytosol, extracellular	82.23	50.2
CDX74207	Canola	cytosol	82.23	50.2
KRH06666	Soybean	nucleus	81.8	50.07
AT3G03780.2	Thale cress	cytosol	81.8	49.93
CDX92051	Canola	cytosol	81.8	49.93
PGSC0003DMT400022467	Potato	cytosol	81.37	49.67
KRH57885	Soybean	cytosol	80.94	49.41
KRH04756	Soybean	cytosol, endoplasmic reticulum, nucleus	80.3	49.02
GSMUA_Achr4P21470_001	Banana	mitochondrion	85.22	48.95
Bra001090.1-P	Field mustard	cytosol	82.01	48.54
KRH04746	Soybean	plastid	17.99	48.28
KRH17939	Soybean	nucleus	81.8	47.57
KRG89918	Soybean	endoplasmic reticulum	81.37	47.56
Solyc01g009180.2.1	Tomato	plastid	81.58	46.63
CDX70955	Canola	mitochondrion	75.8	43.44
CDX88830	Canola	mitochondrion	74.73	42.82
Bra006589.1-P	Field mustard	mitochondrion, plastid	74.73	42.82
AT5G20980.2	Thale cress	mitochondrion	74.3	42.73
CDX92419	Canola	plastid	74.52	39.73
CDY16584	Canola	plastid	73.66	36.4
KRH04683	Soybean	mitochondrion	12.21	20.43
KRH04804	Soybean	endoplasmic reticulum	3.21	4.18

Protein Annotations

KEGG:00270+2.1.1.14	KEGG:00450+2.1.1.14	Gene3D:3.20.20.210	MapMan:4.1.2.2.6.2.1	UniProt:A0A287Q8Z2	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0003871	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009058	GO:GO:0009086	GO:GO:0009987	GO:GO:0016740	GO:GO:0032259
EnsemblPlantsGene:HORVU5Hr1G006780	EnsemblPlants:HORVU5Hr1G006780.7	InterPro:IPR038071	InterPro:Met_Synth_C/arc	PFAM:PF01717	PANTHER:PTHR30519
PANTHER:PTHR30519:SF11	SUPFAM:SSF51726	UniParc:UPI000B48535B	InterPro:UROD/MetE-like_sf	SEG:seg	:

Description

No Description!

Coordinates

chrchr5H:-:12211299..12215273

Molecular Weight (calculated)

52426.8 Da

IEP (calculated)

7.144

GRAVY (calculated)

-0.265

Length

467 amino acids

Sequence
(BLAST)

001: MHTAVDLVNE TKLDDEIKSW LAFAAQKVVE VNALAKALAG QKDEAYFAAN AAALASRRSS PRVTNEEVQK AATALKGSDH RRATTVSARL DAQQKKLNLP
101: VLPTTTIGSF PQTVELRRVR REYKAKKISE EEYTNAIKEE ISKVVKIQEE LDIDVLVHGE PERNDMVEYF GEQLSGFTFT ANGWVQSYGS RCVKPPIIYG
201: DVSRPNPMTV FWSKMAQSMT ARPMKGMLTG PVTILNWSFV RNDQPRFETC YQIALAIKKE VEDLEAGGIQ VGTVVFVSHS SNRFHVQHEH ILRFFLLNGF
301: LQVIQIDEAA LREGLPLRKS EHAFYLDWAV HSFRITNCGV QDTTQIHTHM CYSNFNDIIQ SIINMDADVI TIENSRSDEK LLSVFREGVV YGAGIGPGVY
401: DIHSPRIPSK EEIADRVNKM LAVLDTNILW VNPDCGLKTR KYAEVKPALT NMVEAAKQIR AELAKAQ

Best Arabidopsis Sequence Match ( AT3G03780.1 )
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKSS ADDLQKVSAD LRSDIWKQMS AAGIKYIPSN TFSHYDQVLD TTAMLGAVPS RYGFTSGEIG LDVYFSMARG
101: NASVPAMEMT KWFDTNYHYI VPELGPEVKF SYASHKAVNE YKEAKALGVE TVPVLVGPVS YLLLSKLAKG VDKSFDLLSL LPKILPVYKE VIAELKAAGA
201: SWIQLDEPLF VMDLEGHKLQ AFSGAYAELE STLSGLNVLV ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTIDLIKS GFPQGKYLFA GVVDGRNIWA
301: NDLAASLITL QSLEGVVGKD KLVVSTSCSL LHTAVDLINE TKLDAEIKSW LAFAAQKVVE VDALAKALAG QTNESFFTAN ADALSSRRSS PRVTNESVQK
401: AAAALKGSDH RRTTEVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKISE EDYVKAIKEE IKKVVDIQED LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKPMTV FWSSTAQSMT KRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG
601: VIQIDEAALR EGLPLRKAEH SFYLDWAVHS FRITNCGVQD STQIHTHMCY SNFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSTDE IADRINKMLA VLEQNILWVN PDCGLKTRKY TEVKPALKAM VDAAKLIRSQ LGSAK

Arabidopsis Description

MS25-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.