CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88830	Canola	mitochondrion	81.74	87.85
AT5G20980.2	Thale cress	mitochondrion	81.16	87.56
CDX70955	Canola	mitochondrion	81.16	87.24
CDY16584	Canola	plastid	93.84	86.98
GSMUA_Achr4P22700_001	Banana	cytosol	60.96	79.7
GSMUA_Achr5P02740_001	Banana	cytosol	60.5	79.1
CDY38470	Canola	cytosol	69.06	79.08
PGSC0003DMT400022467	Potato	cytosol	68.95	78.95
Os12t0624000-02	Rice	extracellular	68.95	78.85
CDY25477	Canola	cytosol	68.84	78.82
CDY02674	Canola	cytosol	68.72	78.69
CDX70785	Canola	cytosol	68.49	78.43
CDX85436	Canola	cytosol	68.49	78.43
CDX78767	Canola	cytosol	68.49	78.43
CDX74207	Canola	cytosol	68.49	78.43
Os12t0623900-01	Rice	extracellular	68.49	78.33
GSMUA_Achr7P01530_001	Banana	cytosol	68.26	78.07
HORVU4Hr1G002270.3	Barley	cytosol	68.26	78.07
TraesCS4A01G298700.1	Wheat	cytosol	68.26	78.07
CDX92051	Canola	cytosol	68.15	78.04
VIT_06s0009g01080.t01	Wine grape	plastid	71.46	77.86
Zm00001d031128_P004	Maize	plasma membrane, plastid	68.04	77.81
KXG24060	Sorghum	cytosol	68.04	77.81
KXG37902	Sorghum	cytosol	67.81	77.65
Zm00001d033480_P002	Maize	extracellular	67.69	77.52
KRG89918	Soybean	endoplasmic reticulum	70.55	77.35
KRH17939	Soybean	nucleus	70.55	76.96
CDY50662	Canola	cytosol	65.98	76.76
TraesCS5D01G031300.2	Wheat	golgi, mitochondrion, nucleus, plasma membrane, unclear	67.35	76.62
TraesCS5B01G022800.4	Wheat	extracellular, golgi, plastid, unclear	67.12	76.17
Solyc01g009180.2.1	Tomato	plastid	69.86	74.91
GSMUA_Achr4P21470_001	Banana	mitochondrion	69.52	74.91
Zm00001d013644_P001	Maize	extracellular	68.15	74.91
HORVU5Hr1G006780.7	Barley	cytosol	39.73	74.52
TraesCS5A01G024900.2	Wheat	cytosol	67.92	73.73
TraesCS4B01G014700.2	Wheat	vacuole	68.84	73.0
TraesCS4D01G012900.1	Wheat	mitochondrion	68.72	72.88
KRH04683	Soybean	mitochondrion	22.03	69.18

Protein Annotations

KEGG:00270+2.1.1.14	KEGG:00450+2.1.1.14	Gene3D:3.20.20.210	MapMan:4.1.2.2.6.2.1	GO:A0A078DVE1	EnsemblPlants:CDX92419
ProteinID:CDX92419	ProteinID:CDX92419.1	InterPro:Cbl-indep_Met_Synth_N	InterPro:Cobalamin-indep_Met_synthase	GO:GO:0003674	GO:GO:0003824
GO:GO:0003871	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0008652
GO:GO:0009058	GO:GO:0009086	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00154181001	InterPro:IPR038071
HAMAP:MF_00172	InterPro:Met_Synth_C/arc	PFAM:PF01717	PFAM:PF08267	PANTHER:PTHR30519	PANTHER:PTHR30519:SF11
MetaCyc:PWY-5041	MetaCyc:PWY-6151	MetaCyc:PWY-6936	MetaCyc:PWY-702	SUPFAM:SSF51726	TIGRFAMs:TIGR01371
UniPathway:UPA00051	UniParc:UPI0004EEE611	InterPro:UROD/MetE-like_sf	SEG:seg	:	:

Description

BnaA10g14580D

Coordinates

chrLK031872:+:548333..552413

Molecular Weight (calculated)

97786.2 Da

IEP (calculated)

9.361

GRAVY (calculated)

-0.175

Length

876 amino acids

Sequence
(BLAST)

001: MAVGSYLIPF SFFSMSRSRA ICDALTSAAG IREAQHCPQL CLCMSLLLPR RRLNRNNRSS LKKGKTIRMG QRALQRVPPS LPSRTPSLPP PSSSSPSLRC
101: APSSRRPLRP RPMSSHIVGY PRIGPKRELK FALESFWDGK TGAEDLQNVA ADLRRSIWKH MAGVGIKYIP SNTFSYYDQM LDTTAMLGAV PSRYGWESGE
201: VGFDVYFSMA RGNDSVPAME MTKWFDTNYH YIVPELGPSV KFSYASHKAV EEFKEAKALG IDTVPVLIGP MTYLLLSKPA KDVDKSFCLL SLIDKILPVY
301: KEVLTDLKSA GARWIQFDEP ILVMDLDTNQ LQAFSDAYSH MESSLAGLNV LIATYFADVP AEAYKALTSL KCVTGFGFDL VRGLETLDLI KVDFPRGKLL
401: FAGVVDGRNI WANDLSASLK TLQTLEDIVG KEKVVVSTSC SLLHTAVDLV NEIKLDKELK SWLAFAAQKV VEVNALARSF SGVKDEALFA SNSMRQASRR
501: SSPRVTNATI QHNVAAVIKS DHRRSTKVSA RLQAQQKKLN LPPLPTTTIG SFPQTPDLRR IRKEFKARKI SEIDYVQAIK VEFEKVVKLQ EELGIDVLVH
601: GEAERNDMVE FFGEQLSGFA FTSNGWVQSY GSRCVKPPII YGDVSRPKAM TVFWSSMAQK MTQRPMKGML TGPVTILNWS FVRNDQPRYE TCFQIALAIK
701: DEVKDLEKAG ITVIQIDEAA LREGLPLRRS EQELYLDWAV HAFRITNCDV RDTTQIHTHM CYSNFNDIIN SIINMDADVI TIENSRSDEK LLSVFHEGVK
801: YGAGIGPGVY DIHSPRIPSA EEIAERINKM LAVLDSKVLW VNPDCGLKTR KYSEVKSALS NMVAAAKLIR SQLNKS

Best Arabidopsis Sequence Match ( AT5G20980.1 )
(BLAST)

001: MGQLALQRLQ PLASLPRRPP SLPPPSSATP SLPCATASRR PRFYVARAMS SHIVGYPRIG PKRELKFALE SFWDGKTNVD DLQNVAANLR KSIWKHMAHA
101: GIKYIPSNTF SYYDQMLDTT AMLGAVPSRY GWESGEIGFD VYFSMARGNA SAHAMEMTKW FDTNYHYIVP ELGPDVNFSY ASHKAVVEFK EAKALGIDTV
201: PVLIGPMTYL LLSKPAKGVE KSFCLLSLID KILPVYKEVL ADLKSAGARW IQFDEPILVM DLDTSQLQAF SDAYSHMESS LAGLNVLIAT YFADVPAEAY
301: KTLMSLKCVT GFGFDLVRGL ETLDLIKMNF PRGKLLFAGV VDGRNIWAND LSASLKTLQT LEDIVGKEKV VVSTSCSLLH TAVDLVNEMK LDKELKSWLA
401: FAAQKVVEVN ALAKSFSGAK DEALFSSNSM RQASRRSSPR VTNAAVQQDV DAVKKSDHHR STEVSVRLQA QQKKLNLPAL PTTTIGSFPQ TTDLRRIRRE
501: FKAKKISEVD YVQTIKEEYE KVIKLQEELG IDVLVHGEAE RNDMVEFFGE QLSGFAFTSN GWVQSYGSRC VKPPIIYGDI TRPKAMTVFW SSMAQKMTQR
601: PMKGMLTGPV TILNWSFVRN DQPRHETCFQ IALAIKDEVE DLEKAGVTVI QIDEAALREG LPLRKSEQKF YLDWAVHAFR ITNSGVQDST QIHTHMCYSN
701: FNDIIHSIID MDADVITIEN SRSDEKLLSV FHEGVKYGAG IGPGVYDIHS PRIPSTEEIA ERINKMLAVL DSKVLWVNPD CGLKTRNYSE VKSALSNMVA
801: AAKLIRSQLN KS

Arabidopsis Description

MS35-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WNZ5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.