Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
17827676
plasma membrane: 18260611 extracellular: 18372294 extracellular: 21255809 plastid: 21433289 extracellular: 23159799 nucleus: 24133045 extracellular: 25047395 golgi: 25047511 extracellular: 26072143 plasma membrane: 27800704 plastid: 27992503 extracellular: 28232208 |
msms PMID:
26072143
doi
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
25047395
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.
msms PMID:
23159799
doi
Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID:
21433289
doi
Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.
msms PMID:
21255809
doi
National Agriculture and Food Research Organization, National Agricultural Research Center for Hokkaido Region, 1-Hitsujigaoka, Toyohira-ku, Sapporo 062-8555, Japan. shinano@affrc.go.jp
msms PMID:
18372294
doi
Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.
msms PMID:
25047511
doi
Beijing Key Laboratory of Gene Resource and Molecular Development, Beijing Normal University, College of Life Sciences, Beijing, P. R. China.
msms PMID:
28232208
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Os12t0623900-01 | Rice | extracellular | 98.43 | 98.43 |
Zm00001d031128_P004 | Maize | plasma membrane, plastid | 94.52 | 94.52 |
KXG24060 | Sorghum | cytosol | 94.26 | 94.26 |
GSMUA_Achr4P22700_001 | Banana | cytosol | 79.63 | 91.04 |
GSMUA_Achr5P02740_001 | Banana | cytosol | 78.85 | 90.15 |
GSMUA_Achr7P01530_001 | Banana | cytosol | 89.69 | 89.69 |
CDY38470 | Canola | cytosol | 88.25 | 88.37 |
Solyc10g081510.1.1 | Tomato | extracellular | 87.99 | 88.1 |
Bra002116.1-P | Field mustard | cytosol | 87.86 | 87.97 |
CDY25477 | Canola | cytosol | 87.86 | 87.97 |
CDY02674 | Canola | cytosol | 87.86 | 87.97 |
CDX85436 | Canola | cytosol | 87.86 | 87.97 |
AT5G17920.1 | Thale cress | cytosol | 87.73 | 87.84 |
CDX78767 | Canola | cytosol | 87.73 | 87.84 |
Bra023645.1-P | Field mustard | cytosol | 87.73 | 87.84 |
PGSC0003DMT400072279 | Potato | cytosol, extracellular | 87.6 | 87.71 |
Bra006429.1-P | Field mustard | cytosol | 87.6 | 87.71 |
CDX70785 | Canola | cytosol | 87.6 | 87.71 |
KRH06666 | Soybean | nucleus | 87.21 | 87.55 |
KRG94871 | Soybean | cytosol | 87.08 | 87.42 |
AT3G03780.2 | Thale cress | cytosol | 86.81 | 86.93 |
PGSC0003DMT400022467 | Potato | cytosol | 86.81 | 86.93 |
CDX74207 | Canola | cytosol | 86.81 | 86.93 |
CDX92051 | Canola | cytosol | 86.55 | 86.67 |
KRH57885 | Soybean | cytosol | 86.03 | 86.14 |
KRH04756 | Soybean | cytosol, endoplasmic reticulum, nucleus | 86.03 | 86.14 |
CDY50662 | Canola | cytosol | 84.33 | 85.79 |
GSMUA_Achr4P21470_001 | Banana | mitochondrion | 90.34 | 85.12 |
Bra001090.1-P | Field mustard | cytosol | 86.29 | 83.78 |
KRH04805 | Soybean | plastid | 45.43 | 83.05 |
KRH63013 | Soybean | cytosol | 12.27 | 82.46 |
KRH17939 | Soybean | nucleus | 86.29 | 82.32 |
KRG89918 | Soybean | endoplasmic reticulum | 85.64 | 82.1 |
Solyc01g009180.2.1 | Tomato | plastid | 87.08 | 81.64 |
KRH04804 | Soybean | endoplasmic reticulum | 35.9 | 76.6 |
CDX70955 | Canola | mitochondrion | 79.11 | 74.36 |
AT5G20980.2 | Thale cress | mitochondrion | 78.72 | 74.26 |
Bra006589.1-P | Field mustard | mitochondrion, plastid | 78.98 | 74.23 |
CDX88830 | Canola | mitochondrion | 78.98 | 74.23 |
KRH04683 | Soybean | mitochondrion | 25.85 | 70.97 |
CDX92419 | Canola | plastid | 78.85 | 68.95 |
CDY16584 | Canola | plastid | 78.33 | 63.49 |
KRH04746 | Soybean | plastid | 13.45 | 59.2 |
Protein Annotations
KEGG:00270+2.1.1.14 | KEGG:00450+2.1.1.14 | Gene3D:3.20.20.210 | MapMan:4.1.2.2.6.2.1 | EntrezGene:4352832 | EntrezGene:4352833 |
ProteinID:ABA99428.1 | ProteinID:ABA99429.1 | EMBL:AK067726 | ProteinID:BAF30333.1 | ProteinID:BAT18164.1 | InterPro:Cbl-indep_Met_Synth_N |
InterPro:Cobalamin-indep_Met_synthase | ProteinID:EEE53643.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003871 | GO:GO:0005488 |
GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008270 | GO:GO:0008652 | GO:GO:0008705 |
GO:GO:0009058 | GO:GO:0009086 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0032259 | GO:GO:0046872 |
GO:GO:0050667 | InterPro:IPR038071 | EMBL:JN944357 | HAMAP:MF_00172 | InterPro:Met_Synth_C/arc | EnsemblPlantsGene:Os12g0624000 |
EnsemblPlants:Os12t0624000-02 | PFAM:PF01717 | PFAM:PF08267 | PIRSF:PIRSF000382 | PANTHER:PTHR30519 | PANTHER:PTHR30519:SF11 |
UniProt:Q2QLY4 | SUPFAM:SSF51726 | TIGRFAMs:TIGR01371 | UniParc:UPI0000680BD5 | InterPro:UROD/MetE-like_sf | RefSeq:XP_015619851.1 |
SEG:seg | : | : | : | : | : |
Description
Similar to Methionine synthase protein. (Os12t0624000-01);Similar to Methionine synthase protein. (Os12t0624000-02)
Coordinates
chr12:+:26658185..26662924
Molecular Weight (calculated)
84670.3 Da
IEP (calculated)
6.228
GRAVY (calculated)
-0.128
Length
766 amino acids
Sequence
(BLAST)
(BLAST)
001: MASHIVGYPR MGPKRELKFA LESFWDGKSS AEDLEKVATD LRASIWKQMA DAGIKYIPSN TFSYYDQVLD TTAMLGAVPE RYSWTGGEIG FSTYFSMARG
101: NATVPAMEMT KWFDTNYHFI VPELGPNTKF SYSSHKAVNE YKEAKALGVD TVPVLVGPVS YLLLSKPAKG VEKSFALLSL LSSILPVYKE VIAELKAAGA
201: TWIQFDEPTL VLDLDSHQLA AFSAAYTELE SALSGLNVLI ETYFADIPAE SYKTLTSLNS VTAYGFDLIR GSKTLDLVKS AGFPSGKYLF AGVVDGRNIW
301: ADDLAASLTT LESLEAIVGK DKLVVSTSCS LMHTAVDLVN ETKLDSEIKS WLAFAAQKVV EVNALAKALA GQKDEAYFAA NTAAQASRRS SPRVTNEEVQ
401: KAAAALRGSD HRRATNVSAR LDAQQKKLNL PVLPTTTIGS FPQTVELRRV RREYKAKKIS EDEYVSAIKE EISKVVKIQE ELDIDVLVHG EPERNDMVEY
501: FGEQLSGFAF TANGWVQSYG SRCVKPPIIY GDVSRPNAMT VFWSKMAQSM TSRPMKGMLT GPVTILNWSF VRNDQPRFET CYQIALAIKK EVEDLEAGGI
601: QVIQIDEAAL REGLPLRKAE HAFYLDWAVH SFRITNCGVQ DTTQIHTHMC YSNFNDIIHS IINMDADVIT IENSRSDEKL LSVFREGVKY GAGIGPGVYD
701: IHSPRIPSTE EIADRINKML AVLDTNILWV NPDCGLKTRK YTEVKPALTN MVLAAKLIRT QLASAK
101: NATVPAMEMT KWFDTNYHFI VPELGPNTKF SYSSHKAVNE YKEAKALGVD TVPVLVGPVS YLLLSKPAKG VEKSFALLSL LSSILPVYKE VIAELKAAGA
201: TWIQFDEPTL VLDLDSHQLA AFSAAYTELE SALSGLNVLI ETYFADIPAE SYKTLTSLNS VTAYGFDLIR GSKTLDLVKS AGFPSGKYLF AGVVDGRNIW
301: ADDLAASLTT LESLEAIVGK DKLVVSTSCS LMHTAVDLVN ETKLDSEIKS WLAFAAQKVV EVNALAKALA GQKDEAYFAA NTAAQASRRS SPRVTNEEVQ
401: KAAAALRGSD HRRATNVSAR LDAQQKKLNL PVLPTTTIGS FPQTVELRRV RREYKAKKIS EDEYVSAIKE EISKVVKIQE ELDIDVLVHG EPERNDMVEY
501: FGEQLSGFAF TANGWVQSYG SRCVKPPIIY GDVSRPNAMT VFWSKMAQSM TSRPMKGMLT GPVTILNWSF VRNDQPRFET CYQIALAIKK EVEDLEAGGI
601: QVIQIDEAAL REGLPLRKAE HAFYLDWAVH SFRITNCGVQ DTTQIHTHMC YSNFNDIIHS IINMDADVIT IENSRSDEKL LSVFREGVKY GAGIGPGVYD
701: IHSPRIPSTE EIADRINKML AVLDTNILWV NPDCGLKTRK YTEVKPALTN MVLAAKLIRT QLASAK
001: MASHIVGYPR MGPKRELKFA LESFWDGKST AEDLQKVSAD LRSSIWKQMS AAGTKFIPSN TFAHYDQVLD TTAMLGAVPP RYGYTGGEIG LDVYFSMARG
101: NASVPAMEMT KWFDTNYHYI VPELGPEVNF SYASHKAVNE YKEAKALGVD TVPVLVGPVS YLLLSKAAKG VDKSFELLSL LPKILPIYKE VITELKAAGA
201: TWIQLDEPVL VMDLEGQKLQ AFTGAYAELE STLSGLNVLV ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTLDLVKA GFPEGKYLFA GVVDGRNIWA
301: NDFAASLSTL QALEGIVGKD KLVVSTSCSL LHTAVDLINE TKLDDEIKSW LAFAAQKVVE VNALAKALAG QKDEALFSAN AAALASRRSS PRVTNEGVQK
401: AAAALKGSDH RRATNVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKVSE EDYVKAIKEE IKKVVDLQEE LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKAMTV FWSAMAQSMT SRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG
601: VIQIDEAALR EGLPLRKSEH AFYLDWAVHS FRITNCGVQD STQIHTHMCY SHFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSSEE IADRVNKMLA VLEQNILWVN PDCGLKTRKY TEVKPALKNM VDAAKLIRSQ LASAK
101: NASVPAMEMT KWFDTNYHYI VPELGPEVNF SYASHKAVNE YKEAKALGVD TVPVLVGPVS YLLLSKAAKG VDKSFELLSL LPKILPIYKE VITELKAAGA
201: TWIQLDEPVL VMDLEGQKLQ AFTGAYAELE STLSGLNVLV ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTLDLVKA GFPEGKYLFA GVVDGRNIWA
301: NDFAASLSTL QALEGIVGKD KLVVSTSCSL LHTAVDLINE TKLDDEIKSW LAFAAQKVVE VNALAKALAG QKDEALFSAN AAALASRRSS PRVTNEGVQK
401: AAAALKGSDH RRATNVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKVSE EDYVKAIKEE IKKVVDLQEE LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKAMTV FWSAMAQSMT SRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG
601: VIQIDEAALR EGLPLRKSEH AFYLDWAVHS FRITNCGVQD STQIHTHMCY SHFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSSEE IADRVNKMLA VLEQNILWVN PDCGLKTRKY TEVKPALKNM VDAAKLIRSQ LASAK
Arabidopsis Description
MS15-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O50008]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.