CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06666	Soybean	nucleus	98.03	98.03
KRH04756	Soybean	cytosol, endoplasmic reticulum, nucleus	91.09	90.85
KRH57885	Soybean	cytosol	91.09	90.85
KRH04805	Soybean	plastid	49.41	89.98
Solyc10g081510.1.1	Tomato	extracellular	88.99	88.76
PGSC0003DMT400072279	Potato	cytosol, extracellular	88.47	88.24
CDY02674	Canola	cytosol	88.2	87.97
CDX85436	Canola	cytosol	88.2	87.97
Bra023645.1-P	Field mustard	cytosol	88.07	87.84
CDY38470	Canola	cytosol	88.07	87.84
CDY25477	Canola	cytosol	87.94	87.71
Bra002116.1-P	Field mustard	cytosol	87.94	87.71
AT5G17920.1	Thale cress	cytosol	87.94	87.71
CDX78767	Canola	cytosol	87.68	87.45
Os12t0623900-01	Rice	extracellular	87.68	87.34
Bra006429.1-P	Field mustard	cytosol	87.55	87.32
CDX70785	Canola	cytosol	87.42	87.19
Os12t0624000-02	Rice	extracellular	87.42	87.08
GSMUA_Achr4P22700_001	Banana	cytosol	76.28	86.87
Zm00001d031128_P004	Maize	plasma membrane, plastid	87.16	86.81
KXG37902	Sorghum	cytosol	87.02	86.8
GSMUA_Achr5P02740_001	Banana	cytosol	76.15	86.72
KXG24060	Sorghum	cytosol	87.02	86.68
Zm00001d033480_P002	Maize	extracellular	86.76	86.54
AT3G03780.2	Thale cress	cytosol	86.76	86.54
TraesCS4A01G298700.1	Wheat	cytosol	86.63	86.29
GSMUA_Achr7P01530_001	Banana	cytosol	86.63	86.29
HORVU4Hr1G002270.3	Barley	cytosol	86.37	86.03
CDX74207	Canola	cytosol	86.24	86.01
CDX92051	Canola	cytosol	85.98	85.75
TraesCS5D01G031300.2	Wheat	golgi, mitochondrion, nucleus, plasma membrane, unclear	86.24	85.45
TraesCS5B01G022800.4	Wheat	extracellular, golgi, plastid, unclear	86.24	85.23
CDY50662	Canola	cytosol	83.75	84.86
KRG89918	Soybean	endoplasmic reticulum	87.81	83.85
KRH17939	Soybean	nucleus	88.2	83.81
Bra001090.1-P	Field mustard	cytosol	85.85	83.02
Zm00001d013644_P001	Maize	extracellular	86.11	82.43
HORVU5Hr1G006780.7	Barley	cytosol	50.2	82.01
KRH63013	Soybean	cytosol	12.19	81.58
GSMUA_Achr4P21470_001	Banana	mitochondrion	86.89	81.55
TraesCS5A01G024900.2	Wheat	cytosol	86.24	81.54
TraesCS4B01G014700.2	Wheat	vacuole	86.37	79.78
TraesCS4D01G012900.1	Wheat	mitochondrion	86.37	79.78
KRH04804	Soybean	endoplasmic reticulum	37.09	78.83
KRH04683	Soybean	mitochondrion	25.69	70.25
KRH04746	Soybean	plastid	14.15	62.07

Protein Annotations

KEGG:00270+2.1.1.14	KEGG:00450+2.1.1.14	EntrezGene:100802039	Gene3D:3.20.20.210	MapMan:4.1.2.2.6.2.1	UniProt:A0A0R4J5Z8
EMBL:ACUP02012050	InterPro:Cbl-indep_Met_Synth_N	InterPro:Cobalamin-indep_Met_synthase	ncoils:Coil	EnsemblPlantsGene:GLYMA_19G114500	GO:GO:0003674
GO:GO:0003824	GO:GO:0003871	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0008652	GO:GO:0009058	GO:GO:0009086	GO:GO:0009987	GO:GO:0016740	GO:GO:0032259
InterPro:IPR038071	ProteinID:KRG94870.1	EnsemblPlants:KRG94871	ProteinID:KRG94871	ProteinID:KRG94871.1	HAMAP:MF_00172
InterPro:Met_Synth_C/arc	PFAM:PF01717	PFAM:PF08267	PIRSF:PIRSF000382	PANTHER:PTHR30519	PANTHER:PTHR30519:SF11
MetaCyc:PWY-5041	MetaCyc:PWY-6151	MetaCyc:PWY-6936	MetaCyc:PWY-702	SUPFAM:SSF51726	TIGRFAMs:TIGR01371
UniParc:UPI0001B63753	InterPro:UROD/MetE-like_sf	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:36926096..36931205

Molecular Weight (calculated)

84275.9 Da

IEP (calculated)

6.305

GRAVY (calculated)

-0.140

Length

763 amino acids

Sequence
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKSS AEDLQKVAAD LRSSIWKQMA GAGIKYIPSN TFSFYDQLLD ATATLGAVPP RYGWTGGEIG FDTYFSMARG
101: NATVPAMEMT KWFDTNYHFI VPELGPDVNF TYASHKAVDE YKEAKALGVD TIPVLVGPVT YLLLSKPAKG VEKSFSLLSL LPKVLAVYKE VIADLKAAGA
201: SWIQFDEPTL VLDLESHKLQ AFTDAYAELA PALSDLNVLV ETYFADIPAE AYKTLTSLNG VTAYGFDLVR GTHTLDLIKG GFPSGKYLFA GVVDGRNIWA
301: NDLAASLTTL QGLEGIVGKD KLVVSTSSSL LHTAVDLVNE TKLDDEIKSW LAFAAQKIVE VNALAKALSG NKDVAFFSAN AAAQASRKSS PRVTNEAVQK
401: AAAALKGSDH RRATNVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REFKANKISE EEYVKSIKEE IRKVVELQEE LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT VNGWVQSYGS RCVKPPIIYG DVSRPKPMTV FWSSLAQSFT KRPMKGMLTG PVTILNWSFV RNDQPRSETT YQIALAIKDE VEDLEKAGIT
601: VIQIDEAALR EGLPLRKSEQ AHYLDWAVHA FRITNVGVQD TTQIHTHMCY SNFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPPTEE IADRINKMLA VLEKNILWVN PDCGLKTRKY TEVKPALTNM VAAAKLIRNE LAK

Best Arabidopsis Sequence Match ( AT5G17920.2 )
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKST AEDLQKVSAD LRSSIWKQMS AAGTKFIPSN TFAHYDQVLD TTAMLGAVPP RYGYTGGEIG LDVYFSMARG
101: NASVPAMEMT KWFDTNYHYI VPELGPEVNF SYASHKAVNE YKEAKALGVD TVPVLVGPVS YLLLSKAAKG VDKSFELLSL LPKILPIYKE VITELKAAGA
201: TWIQLDEPVL VMDLEGQKLQ AFTGAYAELE STLSGLNVLV ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTLDLVKA GFPEGKYLFA GVVDGRNIWA
301: NDFAASLSTL QALEGIVGKD KLVVSTSCSL LHTAVDLINE TKLDDEIKSW LAFAAQKVVE VNALAKALAG QKDEALFSAN AAALASRRSS PRVTNEGVQK
401: AAAALKGSDH RRATNVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKVSE EDYVKAIKEE IKKVVDLQEE LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKAMTV FWSAMAQSMT SRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG
601: VIQIDEAALR EGLPLRKSEH AFYLDWAVHS FRITNCGVQD STQIHTHMCY SHFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSSEE IADRVNKMLA VLEQNILWVN PDCGLKTRKY TEVKPALKNM VDAAKLIRSQ LASAK

Arabidopsis Description

MS15-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O50008]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.