CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74207	Canola	cytosol	95.35	93.86
CDX92051	Canola	cytosol	94.69	93.2
AT3G03780.2	Thale cress	cytosol	93.63	92.16
CDX85436	Canola	cytosol	90.31	88.89
CDY02674	Canola	cytosol	90.31	88.89
CDX78767	Canola	cytosol	89.77	88.37
CDY38470	Canola	cytosol	89.64	88.24
CDY25477	Canola	cytosol	89.64	88.24
CDX70785	Canola	cytosol	89.51	88.1
Solyc10g081510.1.1	Tomato	extracellular	86.32	84.97
PGSC0003DMT400072279	Potato	cytosol, extracellular	86.19	84.84
Os12t0623900-01	Rice	extracellular	85.92	84.46
KRH57885	Soybean	cytosol	85.79	84.44
Os12t0624000-02	Rice	extracellular	85.79	84.33
KRH06666	Soybean	nucleus	84.99	83.88
Zm00001d031128_P004	Maize	plasma membrane, plastid	85.26	83.81
Zm00001d033480_P002	Maize	extracellular	85.13	83.79
KXG37902	Sorghum	cytosol	85.13	83.79
KRH04756	Soybean	cytosol, endoplasmic reticulum, nucleus	85.13	83.79
KRG94871	Soybean	cytosol	84.86	83.75
HORVU4Hr1G002270.3	Barley	cytosol	84.99	83.55
TraesCS4A01G298700.1	Wheat	cytosol	84.86	83.42
KXG24060	Sorghum	cytosol	84.86	83.42
GSMUA_Achr4P22700_001	Banana	cytosol	73.97	83.13
KRH04805	Soybean	plastid	46.22	83.05
GSMUA_Achr5P02740_001	Banana	cytosol	73.84	82.99
GSMUA_Achr7P01530_001	Banana	cytosol	83.93	82.51
TraesCS5D01G031300.2	Wheat	golgi, mitochondrion, nucleus, plasma membrane, unclear	84.2	82.34
TraesCS5B01G022800.4	Wheat	extracellular, golgi, plastid, unclear	84.2	82.12
HORVU5Hr1G006780.7	Barley	cytosol	50.86	82.01
KRH63013	Soybean	cytosol	12.22	80.7
Zm00001d013644_P001	Maize	extracellular	84.46	79.8
TraesCS5A01G024900.2	Wheat	cytosol	84.2	78.56
GSMUA_Achr4P21470_001	Banana	mitochondrion	84.46	78.23
TraesCS4B01G014700.2	Wheat	vacuole	84.73	77.24
TraesCS4D01G012900.1	Wheat	mitochondrion	84.46	77.0
KRH04804	Soybean	endoplasmic reticulum	34.4	72.14
CDX88830	Canola	mitochondrion	77.69	71.78
CDX70955	Canola	mitochondrion	77.56	71.66
CDX92419	Canola	plastid	76.76	65.98
CDY16584	Canola	plastid	76.36	60.85
KRH04746	Soybean	plastid	13.55	58.62

Protein Annotations

KEGG:00270+2.1.1.14	KEGG:00450+2.1.1.14	Gene3D:3.20.20.210	MapMan:4.1.2.2.6.2.1	GO:A0A078IL69	UniProt:A0A078IL69
EnsemblPlants:CDY50662	ProteinID:CDY50662	ProteinID:CDY50662.1	InterPro:Cbl-indep_Met_Synth_N	InterPro:Cobalamin-indep_Met_synthase	GO:GO:0003674
GO:GO:0003824	GO:GO:0003871	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0008652	GO:GO:0009058	GO:GO:0009086	GO:GO:0009987	GO:GO:0016740	GO:GO:0032259
EnsemblPlantsGene:GSBRNA2T00097221001	InterPro:IPR038071	HAMAP:MF_00172	InterPro:Met_Synth_C/arc	PFAM:PF01717	PFAM:PF08267
PIRSF:PIRSF000382	PANTHER:PTHR30519	PANTHER:PTHR30519:SF11	MetaCyc:PWY-5041	MetaCyc:PWY-6151	MetaCyc:PWY-6936
MetaCyc:PWY-702	SUPFAM:SSF51726	TIGRFAMs:TIGR01371	UniPathway:UPA00051	UniParc:UPI0004EEC313	InterPro:UROD/MetE-like_sf
SEG:seg	:	:	:	:	:

Description

BnaC05g48040DBnaC05g48040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IL69]

Coordinates

chrLK032929:+:78266..82837

Molecular Weight (calculated)

83719.4 Da

IEP (calculated)

6.586

GRAVY (calculated)

-0.168

Length

753 amino acids

Sequence
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKST AEDLQKVSAD LRSDIWKQMS SAGIKYIPSN TFAYYDQVLD TTAMLGAVPP RYGWNSGEIG FDVYFSMARG
101: NASVPAMEMT KWFDTNYHYI VPELGPEVKL SYSSHKAVNE YKETKALGVE TVPVLVGPVS YLLLSKLAKG VDKSFDLLSV LPKVLPIYKE VIAELKGAGA
201: TWIQFDEPLF VMDLEGHKLQ AFSGAYAELE STLSGLNGVT AFGFDLIRGT KTIDLIKSSF PQGKYLFAGV VDGRNIWAND LAASLITLQS LEGIVGKDKL
301: VVSTSCSLLH TAVDLVNETK LDAEIKSWLA FAAQKVVEVD ALAKALAGQK NESFFSANAA ALSSRRSSPR VTNESVQKAA AALKGSDHRR ATEVNARLDA
401: QQKKLNLPIL PTTTIGSFPQ TVELRKVRRE YKAKKISEED YVKAIKEEIK KVVDIQEELD IDVLVHGEPE RNDMVEYFGE QLSGFAFTAN GWVQSYGSRC
501: VKPPIIYGDV SRPKPMTVFW SSTAQSMTKR PMKGMLTGPV TILNWSFVRN DQPRHETCYQ IALAIKDEVE DLEKGGIGVI QIDEAALREG LPSFYLDWAV
601: HSFRITNCGV QDSTQIHTHM CYSNFNDIIH SIIDMDADVI TIENSRSDEK LLSVFREGVK YGAGIGPGVY DIHSPRIPST DEIADRINKM LAVLEQNILW
701: VNPDCGLKTR KYTEVKPALK NMVDAAKLIR SQLASAKWWE RSILGFRQFF DCV

Best Arabidopsis Sequence Match ( AT3G03780.1 )
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKSS ADDLQKVSAD LRSDIWKQMS AAGIKYIPSN TFSHYDQVLD TTAMLGAVPS RYGFTSGEIG LDVYFSMARG
101: NASVPAMEMT KWFDTNYHYI VPELGPEVKF SYASHKAVNE YKEAKALGVE TVPVLVGPVS YLLLSKLAKG VDKSFDLLSL LPKILPVYKE VIAELKAAGA
201: SWIQLDEPLF VMDLEGHKLQ AFSGAYAELE STLSGLNVLV ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTIDLIKS GFPQGKYLFA GVVDGRNIWA
301: NDLAASLITL QSLEGVVGKD KLVVSTSCSL LHTAVDLINE TKLDAEIKSW LAFAAQKVVE VDALAKALAG QTNESFFTAN ADALSSRRSS PRVTNESVQK
401: AAAALKGSDH RRTTEVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKISE EDYVKAIKEE IKKVVDIQED LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKPMTV FWSSTAQSMT KRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG
601: VIQIDEAALR EGLPLRKAEH SFYLDWAVHS FRITNCGVQD STQIHTHMCY SNFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSTDE IADRINKMLA VLEQNILWVN PDCGLKTRKY TEVKPALKAM VDAAKLIRSQ LGSAK

Arabidopsis Description

MS25-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.