Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
22364583
plastid: 26371478 unclear: 26455813 extracellular: 26583031 nucleus: 28394025 extracellular: 29876421 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID:
26583031
doi
Laboratory of Biochemistry, Wageningen University Wageningen, Netherlands., Molecular Plant Pathology, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands., RNA Biology and Applied Bioinformatics Research Group and MAD: Dutch Genomics Service and Support Provider, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands.
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
msms PMID:
26371478
doi
Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.
msms PMID:
26455813
doi
Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400072279 | Potato | cytosol, extracellular | 98.3 | 98.3 |
AT5G17920.1 | Thale cress | cytosol | 89.41 | 89.41 |
KXG24060 | Sorghum | cytosol | 89.28 | 89.16 |
Zm00001d031128_P004 | Maize | plasma membrane, plastid | 89.28 | 89.16 |
CDY02674 | Canola | cytosol | 89.02 | 89.02 |
CDX85436 | Canola | cytosol | 89.02 | 89.02 |
KRH06666 | Soybean | nucleus | 88.76 | 88.99 |
KRG94871 | Soybean | cytosol | 88.76 | 88.99 |
CDY38470 | Canola | cytosol | 88.76 | 88.76 |
Bra023645.1-P | Field mustard | cytosol | 88.76 | 88.76 |
CDX78767 | Canola | cytosol | 88.63 | 88.63 |
CDX74207 | Canola | cytosol | 88.63 | 88.63 |
CDY25477 | Canola | cytosol | 88.63 | 88.63 |
Bra002116.1-P | Field mustard | cytosol | 88.63 | 88.63 |
AT3G03780.2 | Thale cress | cytosol | 88.63 | 88.63 |
Bra006429.1-P | Field mustard | cytosol | 88.5 | 88.5 |
Os12t0623900-01 | Rice | extracellular | 88.5 | 88.38 |
CDX70785 | Canola | cytosol | 88.37 | 88.37 |
TraesCS4A01G298700.1 | Wheat | cytosol | 88.24 | 88.12 |
CDX92051 | Canola | cytosol | 88.1 | 88.1 |
GSMUA_Achr4P22700_001 | Banana | cytosol | 77.12 | 88.06 |
Os12t0624000-02 | Rice | extracellular | 88.1 | 87.99 |
KXG37902 | Sorghum | cytosol | 87.97 | 87.97 |
Zm00001d033480_P002 | Maize | extracellular | 87.84 | 87.84 |
HORVU4Hr1G002270.3 | Barley | cytosol | 87.84 | 87.73 |
GSMUA_Achr7P01530_001 | Banana | cytosol | 87.71 | 87.6 |
KRH04756 | Soybean | cytosol, endoplasmic reticulum, nucleus | 87.58 | 87.58 |
GSMUA_Achr5P02740_001 | Banana | cytosol | 76.6 | 87.46 |
KRH57885 | Soybean | cytosol | 87.45 | 87.45 |
TraesCS5D01G031300.2 | Wheat | golgi, mitochondrion, nucleus, plasma membrane, unclear | 87.19 | 86.62 |
TraesCS5B01G022800.4 | Wheat | extracellular, golgi, plastid, unclear | 87.32 | 86.53 |
CDY50662 | Canola | cytosol | 84.97 | 86.32 |
Bra001090.1-P | Field mustard | cytosol | 88.1 | 85.42 |
KRH04805 | Soybean | plastid | 46.54 | 84.96 |
Zm00001d013644_P001 | Maize | extracellular | 87.84 | 84.32 |
HORVU5Hr1G006780.7 | Barley | cytosol | 50.85 | 83.3 |
TraesCS5A01G024900.2 | Wheat | cytosol | 87.19 | 82.65 |
GSMUA_Achr4P21470_001 | Banana | mitochondrion | 87.71 | 82.53 |
Solyc01g009180.2.1 | Tomato | plastid | 87.84 | 82.25 |
TraesCS4B01G014700.2 | Wheat | vacuole | 88.1 | 81.6 |
TraesCS4D01G012900.1 | Wheat | mitochondrion | 87.97 | 81.48 |
KRH63013 | Soybean | cytosol | 11.76 | 78.95 |
KRH04804 | Soybean | endoplasmic reticulum | 36.21 | 77.16 |
KRH04746 | Soybean | plastid | 12.94 | 56.9 |
Protein Annotations
KEGG:00270+2.1.1.14 | KEGG:00450+2.1.1.14 | Gene3D:3.20.20.210 | MapMan:4.1.2.2.6.2.1 | InterPro:Cbl-indep_Met_Synth_N | InterPro:Cobalamin-indep_Met_synthase |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003871 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0008270 | GO:GO:0008652 | GO:GO:0008705 | GO:GO:0009058 | GO:GO:0009086 | GO:GO:0009987 |
GO:GO:0016740 | GO:GO:0032259 | GO:GO:0050667 | InterPro:IPR038071 | UniProt:K4D338 | HAMAP:MF_00172 |
InterPro:Met_Synth_C/arc | PFAM:PF01717 | PFAM:PF08267 | PIRSF:PIRSF000382 | PANTHER:PTHR30519 | PANTHER:PTHR30519:SF11 |
SUPFAM:SSF51726 | EnsemblPlantsGene:Solyc10g081510.1 | EnsemblPlants:Solyc10g081510.1.1 | TIGRFAMs:TIGR01371 | UniParc:UPI00027698E8 | InterPro:UROD/MetE-like_sf |
SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr10:+:62566330..62569605
Molecular Weight (calculated)
84729.4 Da
IEP (calculated)
6.350
GRAVY (calculated)
-0.162
Length
765 amino acids
Sequence
(BLAST)
(BLAST)
001: MASHVVGYPR MGPKRELKFA LESFWDGKSS AEDLKKVSAD LRSSIWKQMC DTGIKYIPSN TFSYYDQVLD TTAMLGAVPS RYNWTGGEIE FATYFSMARG
101: NASVPAMEMT KWFDTNYHFI VPELGPDVNF SYASHKAVNE YKEAKAQGVD TVPVLVGPVS YLLLSKPAKG VDKSFPLLSL LDKILPIYKE VIAELKAAGA
201: SWIQLDEPTL VLDLESHKLE AFTKAYADLE SSLSGLNVLV ETYFADVPAE AFKTLTALKG VTAFGFDLVR GTQTLELIKS SFPSGKYLFA GVVDGRNIWA
301: NDLAASLALL QTLEGVVGKD KLVASTSCSL LHTAVDLINE TKLDDEIKSW LAFAAQKVVE VNALAKALSG AKDEAFFSAN AAAQASRKSS PRVTNEAVQK
401: ASAALQGSDH RRATNVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKISE EEYVKAITEE IKKVVDLQEE LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPIIYG DVSRPKPMTV FWSSKAQEMT KRPMKGMLTG PVTILNWSFV RNDQPRFETC YQIALAIKDE VEDLEKAGIT
601: VIQIDEAALR EGLPLRKAEH AFYLNWAVHS FRITNVGIQD TTQIHTHMCY SNFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSTEE IADRVNKMLA VLDTNILWVN PDCGLKTRKY TEVKPALQNM VSAAKTIRTQ LASAK
101: NASVPAMEMT KWFDTNYHFI VPELGPDVNF SYASHKAVNE YKEAKAQGVD TVPVLVGPVS YLLLSKPAKG VDKSFPLLSL LDKILPIYKE VIAELKAAGA
201: SWIQLDEPTL VLDLESHKLE AFTKAYADLE SSLSGLNVLV ETYFADVPAE AFKTLTALKG VTAFGFDLVR GTQTLELIKS SFPSGKYLFA GVVDGRNIWA
301: NDLAASLALL QTLEGVVGKD KLVASTSCSL LHTAVDLINE TKLDDEIKSW LAFAAQKVVE VNALAKALSG AKDEAFFSAN AAAQASRKSS PRVTNEAVQK
401: ASAALQGSDH RRATNVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKISE EEYVKAITEE IKKVVDLQEE LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPIIYG DVSRPKPMTV FWSSKAQEMT KRPMKGMLTG PVTILNWSFV RNDQPRFETC YQIALAIKDE VEDLEKAGIT
601: VIQIDEAALR EGLPLRKAEH AFYLNWAVHS FRITNVGIQD TTQIHTHMCY SNFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSTEE IADRVNKMLA VLDTNILWVN PDCGLKTRKY TEVKPALQNM VSAAKTIRTQ LASAK
001: MASHIVGYPR MGPKRELKFA LESFWDGKST AEDLQKVSAD LRSSIWKQMS AAGTKFIPSN TFAHYDQVLD TTAMLGAVPP RYGYTGGEIG LDVYFSMARG
101: NASVPAMEMT KWFDTNYHYI VPELGPEVNF SYASHKAVNE YKEAKALGVD TVPVLVGPVS YLLLSKAAKG VDKSFELLSL LPKILPIYKE VITELKAAGA
201: TWIQLDEPVL VMDLEGQKLQ AFTGAYAELE STLSGLNVLV ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTLDLVKA GFPEGKYLFA GVVDGRNIWA
301: NDFAASLSTL QALEGIVGKD KLVVSTSCSL LHTAVDLINE TKLDDEIKSW LAFAAQKVVE VNALAKALAG QKDEALFSAN AAALASRRSS PRVTNEGVQK
401: AAAALKGSDH RRATNVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKVSE EDYVKAIKEE IKKVVDLQEE LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKAMTV FWSAMAQSMT SRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG
601: VIQIDEAALR EGLPLRKSEH AFYLDWAVHS FRITNCGVQD STQIHTHMCY SHFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSSEE IADRVNKMLA VLEQNILWVN PDCGLKTRKY TEVKPALKNM VDAAKLIRSQ LASAK
101: NASVPAMEMT KWFDTNYHYI VPELGPEVNF SYASHKAVNE YKEAKALGVD TVPVLVGPVS YLLLSKAAKG VDKSFELLSL LPKILPIYKE VITELKAAGA
201: TWIQLDEPVL VMDLEGQKLQ AFTGAYAELE STLSGLNVLV ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTLDLVKA GFPEGKYLFA GVVDGRNIWA
301: NDFAASLSTL QALEGIVGKD KLVVSTSCSL LHTAVDLINE TKLDDEIKSW LAFAAQKVVE VNALAKALAG QKDEALFSAN AAALASRRSS PRVTNEGVQK
401: AAAALKGSDH RRATNVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKVSE EDYVKAIKEE IKKVVDLQEE LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKAMTV FWSAMAQSMT SRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG
601: VIQIDEAALR EGLPLRKSEH AFYLDWAVHS FRITNCGVQD STQIHTHMCY SHFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSSEE IADRVNKMLA VLEQNILWVN PDCGLKTRKY TEVKPALKNM VDAAKLIRSQ LASAK
Arabidopsis Description
MS15-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O50008]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.