Factsheet for AT3G03780.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74207	Canola	cytosol	95.82	95.82
CDX92051	Canola	cytosol	95.69	95.69
CDY50662	Canola	cytosol	92.16	93.63
AT5G17920.1	Thale cress	cytosol	92.81	92.81
Bra001090.1-P	Field mustard	cytosol	95.69	92.78
Solyc10g081510.1.1	Tomato	extracellular	88.63	88.63
PGSC0003DMT400072279	Potato	cytosol, extracellular	88.37	88.37
Zm00001d031128_P004	Maize	plasma membrane, plastid	87.32	87.21
Zm00001d033480_P002	Maize	extracellular	87.19	87.19
KRH06666	Soybean	nucleus	86.8	87.02
Os12t0623900-01	Rice	extracellular	87.06	86.95
Os12t0624000-02	Rice	extracellular	86.93	86.81
KXG37902	Sorghum	cytosol	86.8	86.8
KRG94871	Soybean	cytosol	86.54	86.76
HORVU4Hr1G002270.3	Barley	cytosol	86.8	86.68
KXG24060	Sorghum	cytosol	86.8	86.68
KRH57885	Soybean	cytosol	86.67	86.67
TraesCS4A01G298700.1	Wheat	cytosol	86.67	86.55
KRH04756	Soybean	cytosol, endoplasmic reticulum, nucleus	86.41	86.41
GSMUA_Achr4P22700_001	Banana	cytosol	75.03	85.67
GSMUA_Achr7P01530_001	Banana	cytosol	85.75	85.64
TraesCS5D01G031300.2	Wheat	golgi, mitochondrion, nucleus, plasma membrane, unclear	86.14	85.58
GSMUA_Achr5P02740_001	Banana	cytosol	74.9	85.52
TraesCS5B01G022800.4	Wheat	extracellular, golgi, plastid, unclear	86.01	85.23
KRH04805	Soybean	plastid	45.75	83.53
Zm00001d013644_P001	Maize	extracellular	86.54	83.06
HORVU5Hr1G006780.7	Barley	cytosol	49.93	81.8
TraesCS5A01G024900.2	Wheat	cytosol	86.14	81.66
GSMUA_Achr4P21470_001	Banana	mitochondrion	85.36	80.32
TraesCS4B01G014700.2	Wheat	vacuole	86.54	80.15
TraesCS4D01G012900.1	Wheat	mitochondrion	86.27	79.9
KRH63013	Soybean	cytosol	11.76	78.95
KRH04804	Soybean	endoplasmic reticulum	36.21	77.16
AT5G20980.2	Thale cress	mitochondrion	79.22	74.63
KRH04746	Soybean	plastid	13.07	57.47

Protein Annotations

KEGG:00270+2.1.1.14	KEGG:00450+2.1.1.14	Gene3D:3.20.20.210	MapMan:4.1.2.2.6.2.1	EntrezGene:821147	UniProt:A0A178VKB3
ProteinID:AAF00639.1	ProteinID:AEE73989.1	ProteinID:AEE73990.1	ProteinID:AEE73991.1	EMBL:AJ608674	ArrayExpress:AT3G03780
EnsemblPlantsGene:AT3G03780	RefSeq:AT3G03780	TAIR:AT3G03780	RefSeq:AT3G03780-TAIR-G	EnsemblPlants:AT3G03780.2	TAIR:AT3G03780.2
Symbol:ATMS2	EMBL:AY040010	EMBL:AY084559	EMBL:AY150385	Unigene:At.18359	InterPro:Cbl-indep_Met_Synth_N
InterPro:Cobalamin-indep_Met_synthase	GO:GO:0003674	GO:GO:0003824	GO:GO:0003871	GO:GO:0005488	GO:GO:0005575
GO:GO:0005576	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005886
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270	GO:GO:0008652
GO:GO:0008705	GO:GO:0009058	GO:GO:0009086	GO:GO:0009506	GO:GO:0009507	GO:GO:0009536
GO:GO:0009628	GO:GO:0009651	GO:GO:0009941	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740
GO:GO:0032259	GO:GO:0046686	GO:GO:0046872	GO:GO:0048046	GO:GO:0050667	InterPro:IPR038071
HAMAP:MF_00172	InterPro:Met_Synth_C/arc	RefSeq:NP_001118564.1	RefSeq:NP_187028.1	RefSeq:NP_850507.1	ProteinID:OAP06148.1
PFAM:PF01717	PFAM:PF08267	PIRSF:PIRSF000382	PO:PO:0000005	PO:PO:0000293	PO:PO:0001016
PO:PO:0001017	PO:PO:0005020	PO:PO:0006339	PO:PO:0007131	PO:PO:0009005	PO:PO:0009025
PO:PO:0025195	PO:PO:0025281	PANTHER:PTHR30519	PANTHER:PTHR30519:SF11	UniProt:Q9SRV5	SUPFAM:SSF51726
TIGRFAMs:TIGR01371	UniParc:UPI00000486A0	InterPro:UROD/MetE-like_sf	SEG:seg	:	:

Description

MS25-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV5]

Coordinates

chr3:+:956862..961032

Molecular Weight (calculated)

84588.4 Da

IEP (calculated)

6.472

GRAVY (calculated)

-0.152

Length

765 amino acids

Sequence
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKSS ADDLQKVSAD LRSDIWKQMS AAGIKYIPSN TFSHYDQVLD TTAMLGAVPS RYGFTSGEIG LDVYFSMARG
101: NASVPAMEMT KWFDTNYHYI VPELGPEVKF SYASHKAVNE YKEAKALGVE TVPVLVGPVS YLLLSKLAKG VDKSFDLLSL LPKILPVYKE VIAELKAAGA
201: SWIQLDEPLF VMDLEGHKLQ AFSGAYAELE STLSGLNVLV ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTIDLIKS GFPQGKYLFA GVVDGRNIWA
301: NDLAASLITL QSLEGVVGKD KLVVSTSCSL LHTAVDLINE TKLDAEIKSW LAFAAQKVVE VDALAKALAG QTNESFFTAN ADALSSRRSS PRVTNESVQK
401: AAAALKGSDH RRTTEVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKISE EDYVKAIKEE IKKVVDIQED LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKPMTV FWSSTAQSMT KRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG
601: VIQIDEAALR EGLPLRKAEH SFYLDWAVHS FRITNCGVQD STQIHTHMCY SNFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSTDE IADRINKMLA VLEQNILWVN PDCGLKTRKY TEVKPALKAM VDAAKLIRSQ LGSAK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.