Factsheet for GSMUA_Achr4P22700_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P02740_001	Banana	cytosol	96.87	96.87
HORVU5Hr1G006780.7	Barley	cytosol	60.0	86.08
KRH04805	Soybean	plastid	53.43	85.44
GSMUA_Achr7P01530_001	Banana	cytosol	96.72	84.6
KRH63013	Soybean	cytosol	14.03	82.46
GSMUA_Achr4P21470_001	Banana	mitochondrion	96.72	79.7
Os12t0624000-02	Rice	extracellular	91.04	79.63
Os12t0623900-01	Rice	extracellular	90.75	79.37
TraesCS4A01G298700.1	Wheat	cytosol	90.3	78.98
HORVU4Hr1G002270.3	Barley	cytosol	90.0	78.72
Zm00001d031128_P004	Maize	plasma membrane, plastid	89.85	78.59
KXG24060	Sorghum	cytosol	89.85	78.59
KXG37902	Sorghum	cytosol	89.1	78.04
Zm00001d033480_P002	Maize	extracellular	88.96	77.91
TraesCS5D01G031300.2	Wheat	golgi, mitochondrion, nucleus, plasma membrane, unclear	88.96	77.4
TraesCS5B01G022800.4	Wheat	extracellular, golgi, plastid, unclear	88.96	77.2
Solyc10g081510.1.1	Tomato	extracellular	88.06	77.12
CDY38470	Canola	cytosol	87.91	76.99
Bra002116.1-P	Field mustard	cytosol	87.76	76.86
CDY25477	Canola	cytosol	87.76	76.86
AT5G17920.1	Thale cress	cytosol	87.61	76.73
CDY02674	Canola	cytosol	87.61	76.73
CDX78767	Canola	cytosol	87.61	76.73
CDX85436	Canola	cytosol	87.61	76.73
Bra006429.1-P	Field mustard	cytosol	87.46	76.6
Bra023645.1-P	Field mustard	cytosol	87.46	76.6
PGSC0003DMT400072279	Potato	cytosol, extracellular	87.46	76.6
PGSC0003DMT400022467	Potato	cytosol	87.31	76.47
CDX70785	Canola	cytosol	87.16	76.34
KRG94871	Soybean	cytosol	86.87	76.28
KRH06666	Soybean	nucleus	86.72	76.15
KRH04756	Soybean	cytosol, endoplasmic reticulum, nucleus	86.12	75.42
KRH57885	Soybean	cytosol	86.12	75.42
CDX74207	Canola	cytosol	85.82	75.16
AT3G03780.2	Thale cress	cytosol	85.67	75.03
CDX92051	Canola	cytosol	85.52	74.9
Zm00001d013644_P001	Maize	extracellular	88.51	74.4
CDY50662	Canola	cytosol	83.13	73.97
TraesCS5A01G024900.2	Wheat	cytosol	88.96	73.85
TraesCS4B01G014700.2	Wheat	vacuole	90.15	73.12
TraesCS4D01G012900.1	Wheat	mitochondrion	89.85	72.88
Bra001090.1-P	Field mustard	cytosol	85.37	72.5
KRG89918	Soybean	endoplasmic reticulum	86.27	72.34
KRH17939	Soybean	nucleus	86.57	72.23
Solyc01g009180.2.1	Tomato	plastid	87.46	71.73
CDX70955	Canola	mitochondrion	80.75	66.38
AT5G20980.2	Thale cress	mitochondrion	80.0	66.01
Bra006589.1-P	Field mustard	mitochondrion, plastid	80.15	65.89
CDX88830	Canola	mitochondrion	80.15	65.89
CDX92419	Canola	plastid	79.7	60.96
CDY16584	Canola	plastid	79.1	56.08
KRH04746	Soybean	plastid	14.18	54.6
KRH04804	Soybean	endoplasmic reticulum	27.46	51.25
KRH04683	Soybean	mitochondrion	20.3	48.75
VIT_10s0042g00970.t01	Wine grape	cytosol	15.82	38.69

Protein Annotations

KEGG:00270+2.1.1.14	KEGG:00450+2.1.1.14	Gene3D:3.20.20.210	MapMan:4.1.2.2.6.2.1	InterPro:Cbl-indep_Met_Synth_N	InterPro:Cobalamin-indep_Met_synthase
GO:GO:0003674	GO:GO:0003824	GO:GO:0003871	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0008652	GO:GO:0009058	GO:GO:0009086	GO:GO:0009987	GO:GO:0016740
GO:GO:0032259	EnsemblPlantsGene:GSMUA_Achr4G22700_001	EnsemblPlants:GSMUA_Achr4P22700_001	EnsemblPlants:GSMUA_Achr4T22700_001	InterPro:IPR038071	UniProt:M0SR82
InterPro:Met_Synth_C/arc	PFAM:PF01717	PFAM:PF08267	PANTHER:PTHR30519	PANTHER:PTHR30519:SF11	SUPFAM:SSF51726
TIGRFAMs:TIGR01371	UniParc:UPI0002957848	InterPro:UROD/MetE-like_sf	SEG:seg	:	:

Description

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Source:GMGC_GENE;Acc:GSMUA_Achr4G22700_001]

Coordinates

chr4:+:22952787..22957694

Molecular Weight (calculated)

74017.0 Da

IEP (calculated)

6.747

GRAVY (calculated)

-0.132

Length

670 amino acids

Sequence
(BLAST)

001: MARGNASVPA MEMTKWFDTN YHFIVPELGP NTKFSYSSHK PVSEYKEAKA LGIETVPVLI GPVTYLLLSK PAKGVEKSFS PLSLLGSILP IYKEVIAELK
101: AAGASWIQFD EPTLVMDLES HQLEAFTKAY TELESSLSGL NVLAETYFAD VPPEAYKTIT ALKSISGFGF DLVRGTKTLD LVKSAGFPAG KYLFAGVVDG
201: RNIWANDLAS SISTLETLEA IVGKDKLVVS TSCSLMHTAV DLVNETKLDS EIKSWLAFAA QKVVEVNALA KALAGQKDEA FFSANAAAQA SRKSSPRVTN
301: EEVQKAAAAL KGSDHRRATN VSARLDAQQK KLNLPILPTT TIGSFPQTMD LRRVRREYKA NKISEEEYVK AIKEEISKVV KLQEELDIDV LVHGEPERND
401: MVEYFGEQLS GFAFTVNGWV QSYGSRCVKP PIIYGDVSRP KAMTVFWSKM AQSMTARPMK GMLTGPVTIL NWSFVRNDQP RFETCYQIAL AIKKEVEDLE
501: AAGIQVIQID EAALREGLPL RKSEQAFYLD WAVHSFRITN CGVQDTTQIH THMCYSNFND IIHSIINMDA DVITIENSRS DEKLLSVFRE GVKYGAGIGP
601: GVYDIHSPRI PSTEEIADRI NKMLAVLETN ILWVNPDCGL KTRKYAEVKP ALTNMVAAAK LLRTQLASTK

Best Arabidopsis Sequence Match ( AT5G17920.2 )
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKST AEDLQKVSAD LRSSIWKQMS AAGTKFIPSN TFAHYDQVLD TTAMLGAVPP RYGYTGGEIG LDVYFSMARG
101: NASVPAMEMT KWFDTNYHYI VPELGPEVNF SYASHKAVNE YKEAKALGVD TVPVLVGPVS YLLLSKAAKG VDKSFELLSL LPKILPIYKE VITELKAAGA
201: TWIQLDEPVL VMDLEGQKLQ AFTGAYAELE STLSGLNVLV ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTLDLVKA GFPEGKYLFA GVVDGRNIWA
301: NDFAASLSTL QALEGIVGKD KLVVSTSCSL LHTAVDLINE TKLDDEIKSW LAFAAQKVVE VNALAKALAG QKDEALFSAN AAALASRRSS PRVTNEGVQK
401: AAAALKGSDH RRATNVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKVSE EDYVKAIKEE IKKVVDLQEE LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKAMTV FWSAMAQSMT SRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG
601: VIQIDEAALR EGLPLRKSEH AFYLDWAVHS FRITNCGVQD STQIHTHMCY SHFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSSEE IADRVNKMLA VLEQNILWVN PDCGLKTRKY TEVKPALKNM VDAAKLIRSQ LASAK

Arabidopsis Description

MS15-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O50008]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.