Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 4
  • mitochondrion 5
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:plastid
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88830 Canola mitochondrion 88.67 88.34
Bra006589.1-P Field mustard mitochondrion, plastid 88.55 88.22
CDX70955 Canola mitochondrion 87.81 87.48
CDX92419 Canola plastid 87.56 81.16
PGSC0003DMT400022467 Potato cytosol 75.49 80.13
GSMUA_Achr4P22700_001 Banana cytosol 66.01 80.0
GSMUA_Achr5P02740_001 Banana cytosol 65.76 79.7
AT5G17920.1 Thale cress cytosol 75.0 79.61
AT3G03780.2 Thale cress cytosol 74.63 79.22
Os12t0624000-02 Rice extracellular 74.26 78.72
GSMUA_Achr7P01530_001 Banana cytosol 73.89 78.33
Os12t0623900-01 Rice extracellular 73.89 78.33
TraesCS4A01G298700.1 Wheat cytosol 73.65 78.07
HORVU4Hr1G002270.3 Barley cytosol 73.65 78.07
VIT_06s0009g01080.t01 Wine grape plastid 77.22 77.99
KRG89918 Soybean endoplasmic reticulum 76.72 77.97
KXG24060 Sorghum cytosol 73.4 77.81
KXG37902 Sorghum cytosol 73.28 77.78
Zm00001d033480_P002 Maize extracellular 73.28 77.78
Zm00001d031128_P004 Maize plasma membrane, plastid 73.28 77.68
KRH17939 Soybean nucleus 76.6 77.46
TraesCS5D01G031300.2 Wheat golgi, mitochondrion, nucleus, plasma membrane, unclear 72.41 76.36
TraesCS5B01G022800.4 Wheat extracellular, golgi, plastid, unclear 72.41 76.17
Solyc01g009180.2.1 Tomato plastid 76.23 75.77
GSMUA_Achr4P21470_001 Banana mitochondrion 75.0 74.91
Zm00001d013644_P001 Maize extracellular 73.4 74.78
CDY16584 Canola plastid 86.95 74.71
HORVU5Hr1G006780.7 Barley cytosol 42.73 74.3
TraesCS5A01G024900.2 Wheat cytosol 72.66 73.11
TraesCS4B01G014700.2 Wheat vacuole 73.89 72.64
TraesCS4D01G012900.1 Wheat mitochondrion 73.65 72.4
KRH04683 Soybean mitochondrion 24.63 71.68
Protein Annotations
KEGG:00270+2.1.1.14KEGG:00450+2.1.1.14Gene3D:3.20.20.210MapMan:4.1.2.2.6.2.1EntrezGene:832223ProteinID:AED92915.1
ProteinID:AED92916.1EMBL:AF296834EMBL:AJ608675EMBL:AK229291ArrayExpress:AT5G20980EnsemblPlantsGene:AT5G20980
RefSeq:AT5G20980TAIR:AT5G20980RefSeq:AT5G20980-TAIR-GEnsemblPlants:AT5G20980.2TAIR:AT5G20980.2Symbol:ATMS3
Unigene:At.31122InterPro:Cbl-indep_Met_Synth_NInterPro:Cobalamin-indep_Met_synthaseGO:GO:0003674GO:GO:0003824GO:GO:0003871
GO:GO:0005488GO:GO:0005575GO:GO:0005576GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005829GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008270GO:GO:0008652
GO:GO:0008705GO:GO:0009058GO:GO:0009086GO:GO:0009507GO:GO:0009536GO:GO:0009987
GO:GO:0016740GO:GO:0032259GO:GO:0046872GO:GO:0050667InterPro:IPR038071HAMAP:MF_00172
InterPro:Met_Synth_C/arcRefSeq:NP_001078611.1RefSeq:NP_197598.2PFAM:PF01717PFAM:PF08267PIRSF:PIRSF000382
PO:PO:0000005PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001016
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025281PANTHER:PTHR30519PANTHER:PTHR30519:SF11UniProt:Q0WNZ5SUPFAM:SSF51726
TIGRFAMs:TIGR01371UniParc:UPI0000196E2EInterPro:UROD/MetE-like_sfSEG:seg::
Description
MS35-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WNZ5]
Coordinates
chr5:-:7122800..7128359
Molecular Weight (calculated)
90599.1 Da
IEP (calculated)
8.194
GRAVY (calculated)
-0.177
Length
812 amino acids
Sequence
(BLAST)
001: MGQLALQRLQ PLASLPRRPP SLPPPSSATP SLPCATASRR PRFYVARAMS SHIVGYPRIG PKRELKFALE SFWDGKTNVD DLQNVAANLR KSIWKHMAHA
101: GIKYIPSNTF SYYDQMLDTT AMLGAVPSRY GWESGEIGFD VYFSMARGNA SAHAMEMTKW FDTNYHYIVP ELGPDVNFSY ASHKAVVEFK EAKALGIDTV
201: PVLIGPMTYL LLSKPAKGVE KSFCLLSLID KILPVYKEVL ADLKSAGARW IQFDEPILVM DLDTSQLQAF SDAYSHMESS LAGLNVLIAT YFADVPAEAY
301: KTLMSLKCVT GFGFDLVRGL ETLDLIKMNF PRGKLLFAGV VDGRNIWAND LSASLKTLQT LEDIVGKEKV VVSTSCSLLH TAVDLVNEMK LDKELKSWLA
401: FAAQKVVEVN ALAKSFSGAK DEALFSSNSM RQASRRSSPR VTNAAVQQDV DAVKKSDHHR STEVSVRLQA QQKKLNLPAL PTTTIGSFPQ TTDLRRIRRE
501: FKAKKISEVD YVQTIKEEYE KVIKLQEELG IDVLVHGEAE RNDMVEFFGE QLSGFAFTSN GWVQSYGSRC VKPPIIYGDI TRPKAMTVFW SSMAQKMTQR
601: PMKGMLTGPV TILNWSFVRN DQPRHETCFQ IALAIKDEVE DLEKAGVTVI QIDEAALREG LPLRKSEQKF YLDWAVHAFR ITNSGVQDST QIHTHMCYSN
701: FNDIIHSIID MDADVITIEN SRSDEKLLSV FHEGVKYGAG IGPGVYDIHS PRIPSTEEIA ERINKMLAVL DSKVLWVNPD CGLKTRNYSE VKSALSNMVA
801: AAKLIRSQLN KS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.