Factsheet for TraesCS4A01G298700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G002270.3	Barley	cytosol	98.96	98.96
KXG37902	Sorghum	cytosol	94.52	94.64
Zm00001d033480_P002	Maize	extracellular	94.39	94.51
TraesCS4D01G012900.1	Wheat	mitochondrion	99.48	92.25
TraesCS4B01G014700.2	Wheat	vacuole	99.48	92.25
GSMUA_Achr4P22700_001	Banana	cytosol	78.98	90.3
Zm00001d013644_P001	Maize	extracellular	93.86	90.21
GSMUA_Achr5P02740_001	Banana	cytosol	78.33	89.55
GSMUA_Achr7P01530_001	Banana	cytosol	88.51	88.51
Solyc10g081510.1.1	Tomato	extracellular	88.12	88.24
TraesCS5A01G024900.2	Wheat	cytosol	92.69	87.98
PGSC0003DMT400072279	Potato	cytosol, extracellular	87.6	87.71
CDY38470	Canola	cytosol	87.6	87.71
CDX85436	Canola	cytosol	87.47	87.58
AT5G17920.1	Thale cress	cytosol	87.21	87.32
Bra002116.1-P	Field mustard	cytosol	87.21	87.32
CDY02674	Canola	cytosol	87.21	87.32
CDY25477	Canola	cytosol	87.21	87.32
Bra023645.1-P	Field mustard	cytosol	87.21	87.32
CDX78767	Canola	cytosol	87.08	87.19
Bra006429.1-P	Field mustard	cytosol	86.95	87.06
CDX70785	Canola	cytosol	86.81	86.93
CDX74207	Canola	cytosol	86.68	86.8
PGSC0003DMT400022467	Potato	cytosol	86.68	86.8
AT3G03780.2	Thale cress	cytosol	86.55	86.67
KRG94871	Soybean	cytosol	86.29	86.63
CDX92051	Canola	cytosol	86.42	86.54
KRH06666	Soybean	nucleus	86.16	86.5
KRH57885	Soybean	cytosol	85.25	85.36
KRH04756	Soybean	cytosol, endoplasmic reticulum, nucleus	85.12	85.23
CDY50662	Canola	cytosol	83.42	84.86
Bra001090.1-P	Field mustard	cytosol	86.16	83.65
GSMUA_Achr4P21470_001	Banana	mitochondrion	88.64	83.52
KRH04805	Soybean	plastid	45.43	83.05
KRG89918	Soybean	endoplasmic reticulum	85.9	82.35
KRH17939	Soybean	nucleus	86.29	82.32
Solyc01g009180.2.1	Tomato	plastid	87.21	81.76
KRH63013	Soybean	cytosol	12.14	81.58
KRH04804	Soybean	endoplasmic reticulum	35.25	75.21
CDX70955	Canola	mitochondrion	78.59	73.86
CDX88830	Canola	mitochondrion	78.46	73.74
Bra006589.1-P	Field mustard	mitochondrion, plastid	78.46	73.74
AT5G20980.2	Thale cress	mitochondrion	78.07	73.65
KRH04683	Soybean	mitochondrion	25.2	69.18
CDX92419	Canola	plastid	78.07	68.26
CDY16584	Canola	plastid	77.55	62.86
KRH04746	Soybean	plastid	13.45	59.2
VIT_10s0042g00970.t01	Wine grape	cytosol	14.36	40.15

Protein Annotations

KEGG:00270+2.1.1.14	KEGG:00450+2.1.1.14	Gene3D:3.20.20.210	MapMan:4.1.2.2.6.2.1	InterPro:Cbl-indep_Met_Synth_N	InterPro:Cobalamin-indep_Met_synthase
GO:GO:0003674	GO:GO:0003824	GO:GO:0003871	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0008652	GO:GO:0009058	GO:GO:0009086	GO:GO:0009987	GO:GO:0016740
InterPro:IPR038071	HAMAP:MF_00172	InterPro:Met_Synth_C/arc	PFAM:PF01717	PFAM:PF08267	PIRSF:PIRSF000382
PANTHER:PTHR30519	PANTHER:PTHR30519:SF11	SUPFAM:SSF51726	TIGRFAMs:TIGR01371	EnsemblPlantsGene:TraesCS4A01G298700	EnsemblPlants:TraesCS4A01G298700.1
InterPro:UROD/MetE-like_sf	TIGR:cd03311	TIGR:cd03312	SEG:seg	:	:

Description

No Description!

Coordinates

chr4A:-:597677918..597682345

Molecular Weight (calculated)

84440.0 Da

IEP (calculated)

6.189

GRAVY (calculated)

-0.124

Length

766 amino acids

Sequence
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKSS AEDLEKVAAD LRASIWKQMS EAGIKYIPSN TFSYYDQVLD TTAMLGAVPD RYSWTGGEIG HSTYFSMARG
101: NATVPAMEMT KWFDTNYHFI VPELSPATKF SYASHKAVSE YKEAKALGVD TVPVLVGPVS YLLLSKAAKG VEKSFSLLSL LDSILPIYKE VVAELKAAGA
201: SWIQFDEPTL VKDLAVHELA AFSSAYAELE SALSGLNVLI ETYFADVPAE SYKTLTSLSG VTAYGFDLVR GTKTLELIKS AGIPSGKYLF AGVVDGRNIW
301: ADDLAASLST LQSLEAVVGK DKLVVSTSCS LMHTAVDLVN ETKLDSEIKS WLAFAAQKVV EVNALGKALA GLKDEAYFAA NAAAQASRRS SPRVNNEEVQ
401: KAAAALKGSD HRRATPVSAR LDAQQKKLNL PILPTTTIGS FPQTMDLRRV RREYKAKKIS EEEYVSAIKE EISKVVKIQE ELDIDVLVHG EPERNDMVEY
501: FGEQLSGFAF TANGWVQSYG SRCVKPPIIY GDVSRPNPMT VFWSKMAQDM TPRPMKGMLT GPVTILNWSF VRNDQPRFET CYQIALAIKK EVEDLEAGGI
601: QVIQIDEAAL REGLPLRKSE HAFYLDWAVH SFRITNCGVQ DTTQIHTHMC YSNFNDIIHS IINMDADVIT IENSRSDEKL LSVFREGVTY GAGIGPGVYD
701: IHSPRIPSTE EIADRVNKML AVLDTNILWV NPDCGLKTRK YTEVKPALTN MVAAAKLIRT QLASTK

Best Arabidopsis Sequence Match ( AT3G03780.2 )
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKSS ADDLQKVSAD LRSDIWKQMS AAGIKYIPSN TFSHYDQVLD TTAMLGAVPS RYGFTSGEIG LDVYFSMARG
101: NASVPAMEMT KWFDTNYHYI VPELGPEVKF SYASHKAVNE YKEAKALGVE TVPVLVGPVS YLLLSKLAKG VDKSFDLLSL LPKILPVYKE VIAELKAAGA
201: SWIQLDEPLF VMDLEGHKLQ AFSGAYAELE STLSGLNVLV ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTIDLIKS GFPQGKYLFA GVVDGRNIWA
301: NDLAASLITL QSLEGVVGKD KLVVSTSCSL LHTAVDLINE TKLDAEIKSW LAFAAQKVVE VDALAKALAG QTNESFFTAN ADALSSRRSS PRVTNESVQK
401: AAAALKGSDH RRTTEVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKISE EDYVKAIKEE IKKVVDIQED LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKPMTV FWSSTAQSMT KRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG
601: VIQIDEAALR EGLPLRKAEH SFYLDWAVHS FRITNCGVQD STQIHTHMCY SNFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSTDE IADRINKMLA VLEQNILWVN PDCGLKTRKY TEVKPALKAM VDAAKLIRSQ LGSAK

Arabidopsis Description

MS25-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.