CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63013	Soybean	cytosol	21.72	79.82
HORVU5Hr1G006780.7	Barley	cytosol	79.47	71.31
GSMUA_Achr4P22700_001	Banana	cytosol	85.44	53.43
GSMUA_Achr5P02740_001	Banana	cytosol	84.49	52.84
KRH04756	Soybean	cytosol, endoplasmic reticulum, nucleus	94.27	51.63
KRH57885	Soybean	cytosol	92.12	50.46
KRG94871	Soybean	cytosol	89.98	49.41
KRH06666	Soybean	nucleus	89.5	49.15
KRH04746	Soybean	plastid	20.29	48.85
GSMUA_Achr7P01530_001	Banana	cytosol	85.2	46.61
Solyc10g081510.1.1	Tomato	extracellular	84.96	46.54
PGSC0003DMT400072279	Potato	cytosol, extracellular	84.49	46.27
CDY50662	Canola	cytosol	83.05	46.22
KXG37902	Sorghum	cytosol	84.25	46.14
Zm00001d033480_P002	Maize	extracellular	84.25	46.14
KXG24060	Sorghum	cytosol	83.77	45.82
Zm00001d031128_P004	Maize	plasma membrane, plastid	83.77	45.82
AT3G03780.2	Thale cress	cytosol	83.53	45.75
Os12t0623900-01	Rice	extracellular	83.53	45.69
AT5G17920.1	Thale cress	cytosol	83.29	45.62
Bra002116.1-P	Field mustard	cytosol	83.29	45.62
CDY38470	Canola	cytosol	83.29	45.62
CDY25477	Canola	cytosol	83.29	45.62
CDY02674	Canola	cytosol	83.29	45.62
CDX74207	Canola	cytosol	83.29	45.62
Bra023645.1-P	Field mustard	cytosol	83.05	45.49
CDX92051	Canola	cytosol	83.05	45.49
CDX85436	Canola	cytosol	83.05	45.49
CDX78767	Canola	cytosol	83.05	45.49
TraesCS4A01G298700.1	Wheat	cytosol	83.05	45.43
Os12t0624000-02	Rice	extracellular	83.05	45.43
Bra006429.1-P	Field mustard	cytosol	82.82	45.36
CDX70785	Canola	cytosol	82.82	45.36
HORVU4Hr1G002270.3	Barley	cytosol	82.82	45.3
TraesCS5B01G022800.4	Wheat	extracellular, golgi, plastid, unclear	81.86	44.43
KRH17939	Soybean	nucleus	84.96	44.33
KRG89918	Soybean	endoplasmic reticulum	84.49	44.31
TraesCS5D01G031300.2	Wheat	golgi, mitochondrion, nucleus, plasma membrane, unclear	81.38	44.29
Bra001090.1-P	Field mustard	cytosol	83.29	44.23
GSMUA_Achr4P21470_001	Banana	mitochondrion	85.68	44.16
Zm00001d013644_P001	Maize	extracellular	82.58	43.41
TraesCS5A01G024900.2	Wheat	cytosol	81.38	42.26
TraesCS4B01G014700.2	Wheat	vacuole	83.05	42.13
TraesCS4D01G012900.1	Wheat	mitochondrion	83.05	42.13
KRH04683	Soybean	mitochondrion	16.23	24.37
KRH04804	Soybean	endoplasmic reticulum	5.73	6.69

Protein Annotations

KEGG:00270+2.1.1.14	KEGG:00450+2.1.1.14	Gene3D:3.20.20.210	MapMan:4.1.2.2.6.2.1	UniProt:A0A0R0FQE0	EMBL:ACUP02010547
EnsemblPlantsGene:GLYMA_17G188100	GO:GO:0003674	GO:GO:0003824	GO:GO:0003871	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0009058	GO:GO:0009086	GO:GO:0009987	GO:GO:0016740
GO:GO:0032259	InterPro:IPR038071	EnsemblPlants:KRH04805	ProteinID:KRH04805	ProteinID:KRH04805.1	InterPro:Met_Synth_C/arc
PFAM:PF01717	PANTHER:PTHR30519	PANTHER:PTHR30519:SF11	MetaCyc:PWY-5041	MetaCyc:PWY-6151	MetaCyc:PWY-6936
MetaCyc:PWY-702	SUPFAM:SSF51726	UniParc:UPI0006EDEFB6	InterPro:UROD/MetE-like_sf	:	:

Description

hypothetical protein

Coordinates

chr17:+:24349430..24353930

Molecular Weight (calculated)

47134.4 Da

IEP (calculated)

8.296

GRAVY (calculated)

-0.371

Length

419 amino acids

Sequence
(BLAST)

001: MRDIPFTIFS SPKDFSAPKF KCPNLIANAF FSSNADAEAS RKFSPRVTNE AVQKAAAALK GSDHRRATNV STRLDAQQKK LNLPILPTTT IGSFPQTVEL
101: RRVRREYKAN KISEEEYVSS IKEEIRKVVE LQENLDIDVL VHGEPERNDM VEYFGEQLSG FAFTVNGWVQ SYGSRCVKPP IIYGDVSRPK PMTVFWSSTA
201: QSMTKRPMKG MLTGPVTILN WSFVRNDHPR SETTYQIALA IKDEVEDLEK AGITVIQIDE AALREGLPLR KSEQANYLDW VVHAFRITNV GVQDTTQIHT
301: HMCYSNFNDI IHSIIDMDAD VITIENSRSD EKLLSVFREG VKYGAGIGPG VYDIHSPRIP PTDEIADRIN KMLAVLEKNI LWVNPDCGLK TRKYPEVNPA
401: LTNMVAATKL IRNKLSSGK

Best Arabidopsis Sequence Match ( AT3G03780.1 )
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKSS ADDLQKVSAD LRSDIWKQMS AAGIKYIPSN TFSHYDQVLD TTAMLGAVPS RYGFTSGEIG LDVYFSMARG
101: NASVPAMEMT KWFDTNYHYI VPELGPEVKF SYASHKAVNE YKEAKALGVE TVPVLVGPVS YLLLSKLAKG VDKSFDLLSL LPKILPVYKE VIAELKAAGA
201: SWIQLDEPLF VMDLEGHKLQ AFSGAYAELE STLSGLNVLV ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTIDLIKS GFPQGKYLFA GVVDGRNIWA
301: NDLAASLITL QSLEGVVGKD KLVVSTSCSL LHTAVDLINE TKLDAEIKSW LAFAAQKVVE VDALAKALAG QTNESFFTAN ADALSSRRSS PRVTNESVQK
401: AAAALKGSDH RRTTEVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKISE EDYVKAIKEE IKKVVDIQED LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKPMTV FWSSTAQSMT KRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG
601: VIQIDEAALR EGLPLRKAEH SFYLDWAVHS FRITNCGVQD STQIHTHMCY SNFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSTDE IADRINKMLA VLEQNILWVN PDCGLKTRKY TEVKPALKAM VDAAKLIRSQ LGSAK

Arabidopsis Description

MS25-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.