CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04746	Soybean	plastid	61.4	40.23
KRH04805	Soybean	plastid	79.82	21.72
HORVU5Hr1G006780.7	Barley	cytosol	74.56	18.2
GSMUA_Achr4P22700_001	Banana	cytosol	82.46	14.03
GSMUA_Achr5P02740_001	Banana	cytosol	81.58	13.88
Os12t0624000-02	Rice	extracellular	82.46	12.27
CDY50662	Canola	cytosol	80.7	12.22
KRG94871	Soybean	cytosol	81.58	12.19
KRH06666	Soybean	nucleus	81.58	12.19
TraesCS4A01G298700.1	Wheat	cytosol	81.58	12.14
HORVU4Hr1G002270.3	Barley	cytosol	81.58	12.14
KRH17939	Soybean	nucleus	85.09	12.08
KRH57885	Soybean	cytosol	80.7	12.03
KXG37902	Sorghum	cytosol	80.7	12.03
Os12t0623900-01	Rice	extracellular	80.7	12.01
PGSC0003DMT400072279	Potato	cytosol, extracellular	79.82	11.9
Zm00001d033480_P002	Maize	extracellular	79.82	11.9
KXG24060	Sorghum	cytosol	79.82	11.88
GSMUA_Achr7P01530_001	Banana	cytosol	79.82	11.88
Zm00001d031128_P004	Maize	plasma membrane, plastid	79.82	11.88
AT5G17920.1	Thale cress	cytosol	78.95	11.76
KRH04756	Soybean	cytosol, endoplasmic reticulum, nucleus	78.95	11.76
Solyc10g081510.1.1	Tomato	extracellular	78.95	11.76
CDX70785	Canola	cytosol	78.95	11.76
AT3G03780.2	Thale cress	cytosol	78.95	11.76
Bra002116.1-P	Field mustard	cytosol	78.95	11.76
Bra023645.1-P	Field mustard	cytosol	78.95	11.76
CDX74207	Canola	cytosol	78.95	11.76
CDX78767	Canola	cytosol	78.95	11.76
CDX85436	Canola	cytosol	78.95	11.76
CDX92051	Canola	cytosol	78.95	11.76
CDY02674	Canola	cytosol	78.95	11.76
CDY25477	Canola	cytosol	78.95	11.76
CDY38470	Canola	cytosol	78.95	11.76
KRG89918	Soybean	endoplasmic reticulum	81.58	11.64
Bra006429.1-P	Field mustard	cytosol	78.07	11.63
Zm00001d013644_P001	Maize	extracellular	79.82	11.42
GSMUA_Achr4P21470_001	Banana	mitochondrion	80.7	11.32
TraesCS4B01G014700.2	Wheat	vacuole	81.58	11.26
TraesCS4D01G012900.1	Wheat	mitochondrion	81.58	11.26
Bra001090.1-P	Field mustard	cytosol	77.19	11.15
TraesCS5D01G031300.2	Wheat	golgi, mitochondrion, nucleus, plasma membrane, unclear	74.56	11.04
TraesCS5B01G022800.4	Wheat	extracellular, golgi, plastid, unclear	74.56	11.01
TraesCS5A01G024900.2	Wheat	cytosol	74.56	10.53
KRH04683	Soybean	mitochondrion	19.3	7.89
KRH04804	Soybean	endoplasmic reticulum	4.39	1.39

Protein Annotations

KEGG:00270+2.1.1.14	KEGG:00450+2.1.1.14	Gene3D:3.20.20.210	MapMan:35.1	EMBL:ACUP02002556	EnsemblPlantsGene:GLYMA_04G149000
GO:GO:0003674	GO:GO:0003824	GO:GO:0003871	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0008705	GO:GO:0009058	GO:GO:0009086	GO:GO:0009987	GO:GO:0016740
GO:GO:0032259	GO:GO:0050667	InterPro:IPR038071	UniProt:K7KK03	EnsemblPlants:KRH63013	ProteinID:KRH63013
ProteinID:KRH63013.1	InterPro:Met_Synth_C/arc	PFAM:PF01717	PANTHER:PTHR30519	PANTHER:PTHR30519:SF11	MetaCyc:PWY-5041
MetaCyc:PWY-6151	MetaCyc:PWY-6936	MetaCyc:PWY-702	SUPFAM:SSF51726	UniParc:UPI000296F896	InterPro:UROD/MetE-like_sf

Description

hypothetical protein

Coordinates

chr4:-:31308017..31308361

Molecular Weight (calculated)

12980.1 Da

IEP (calculated)

6.495

GRAVY (calculated)

0.161

Length

114 amino acids

Sequence
(BLAST)

001: MCYSNFNDII HSIINMDVDV ITIENSRSDE NLLLVICEGV KYRAGIYDIH SPRIPPTEEI VDRINKMLVV LESNILWVNP DCGLMTRKYT KVKPALTNMV
101: VVIKLICNQL ASTK

Best Arabidopsis Sequence Match ( AT3G03780.1 )
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKSS ADDLQKVSAD LRSDIWKQMS AAGIKYIPSN TFSHYDQVLD TTAMLGAVPS RYGFTSGEIG LDVYFSMARG
101: NASVPAMEMT KWFDTNYHYI VPELGPEVKF SYASHKAVNE YKEAKALGVE TVPVLVGPVS YLLLSKLAKG VDKSFDLLSL LPKILPVYKE VIAELKAAGA
201: SWIQLDEPLF VMDLEGHKLQ AFSGAYAELE STLSGLNVLV ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTIDLIKS GFPQGKYLFA GVVDGRNIWA
301: NDLAASLITL QSLEGVVGKD KLVVSTSCSL LHTAVDLINE TKLDAEIKSW LAFAAQKVVE VDALAKALAG QTNESFFTAN ADALSSRRSS PRVTNESVQK
401: AAAALKGSDH RRTTEVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKISE EDYVKAIKEE IKKVVDIQED LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKPMTV FWSSTAQSMT KRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG
601: VIQIDEAALR EGLPLRKAEH SFYLDWAVHS FRITNCGVQD STQIHTHMCY SNFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSTDE IADRINKMLA VLEQNILWVN PDCGLKTRKY TEVKPALKAM VDAAKLIRSQ LGSAK

Arabidopsis Description

MS25-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRV5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.