CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031128_P004	Maize	plasma membrane, plastid	97.78	97.78
Os12t0623900-01	Rice	extracellular	94.91	94.91
Os12t0624000-02	Rice	extracellular	94.26	94.26
KXG37902	Sorghum	cytosol	93.47	93.59
GSMUA_Achr4P22700_001	Banana	cytosol	78.59	89.85
Solyc10g081510.1.1	Tomato	extracellular	89.16	89.28
GSMUA_Achr5P02740_001	Banana	cytosol	78.07	89.25
GSMUA_Achr7P01530_001	Banana	cytosol	89.03	89.03
PGSC0003DMT400072279	Potato	cytosol, extracellular	88.51	88.63
CDX85436	Canola	cytosol	87.6	87.71
CDY38470	Canola	cytosol	87.6	87.71
Bra023645.1-P	Field mustard	cytosol	87.47	87.58
CDY02674	Canola	cytosol	87.34	87.45
AT5G17920.1	Thale cress	cytosol	87.21	87.32
Bra002116.1-P	Field mustard	cytosol	87.21	87.32
CDY25477	Canola	cytosol	87.21	87.32
CDX78767	Canola	cytosol	87.08	87.19
KRH06666	Soybean	nucleus	86.81	87.16
Bra006429.1-P	Field mustard	cytosol	86.95	87.06
CDX74207	Canola	cytosol	86.95	87.06
KRG94871	Soybean	cytosol	86.68	87.02
CDX70785	Canola	cytosol	86.81	86.93
PGSC0003DMT400022467	Potato	cytosol	86.81	86.93
AT3G03780.2	Thale cress	cytosol	86.68	86.8
CDX92051	Canola	cytosol	86.68	86.8
KRH04756	Soybean	cytosol, endoplasmic reticulum, nucleus	85.77	85.88
KRH57885	Soybean	cytosol	85.77	85.88
CDY50662	Canola	cytosol	83.42	84.86
GSMUA_Achr4P21470_001	Banana	mitochondrion	89.16	84.01
Bra001090.1-P	Field mustard	cytosol	86.42	83.9
KRH04805	Soybean	plastid	45.82	83.77
KRH17939	Soybean	nucleus	86.16	82.19
KRG89918	Soybean	endoplasmic reticulum	85.51	81.98
Solyc01g009180.2.1	Tomato	plastid	87.21	81.76
KRH63013	Soybean	cytosol	11.88	79.82
KRH04804	Soybean	endoplasmic reticulum	35.38	75.49
CDX70955	Canola	mitochondrion	78.2	73.5
AT5G20980.2	Thale cress	mitochondrion	77.81	73.4
CDX88830	Canola	mitochondrion	78.07	73.37
Bra006589.1-P	Field mustard	mitochondrion, plastid	78.07	73.37
KRH04683	Soybean	mitochondrion	25.59	70.25
CDX92419	Canola	plastid	77.81	68.04
CDY16584	Canola	plastid	77.42	62.75
KRH04746	Soybean	plastid	12.92	56.9

Protein Annotations

KEGG:00270+2.1.1.14	KEGG:00450+2.1.1.14	Gene3D:3.20.20.210	MapMan:4.1.2.2.6.2.1	UniProt:A0A1B6PEC9	InterPro:Cbl-indep_Met_Synth_N
InterPro:Cobalamin-indep_Met_synthase	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0003871	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0008652	GO:GO:0009058	GO:GO:0009086
GO:GO:0009987	GO:GO:0016740	GO:GO:0032259	InterPro:IPR038071	ProteinID:KXG24059.1	EnsemblPlants:KXG24060
ProteinID:KXG24060	ProteinID:KXG24060.1	HAMAP:MF_00172	InterPro:Met_Synth_C/arc	PFAM:PF01717	PFAM:PF08267
PIRSF:PIRSF000382	PANTHER:PTHR30519	PANTHER:PTHR30519:SF11	MetaCyc:PWY-5041	MetaCyc:PWY-6151	MetaCyc:PWY-6936
MetaCyc:PWY-702	EnsemblPlantsGene:SORBI_3008G178800	SUPFAM:SSF51726	TIGRFAMs:TIGR01371	UniParc:UPI0001FCD36F	InterPro:UROD/MetE-like_sf
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:61261975..61267944

Molecular Weight (calculated)

84411.9 Da

IEP (calculated)

5.613

GRAVY (calculated)

-0.121

Length

766 amino acids

Sequence
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKST AEDLEKVATD LRASIWKQMA DAGIKYIPSN TFSYYDQVLD TTAMLGAVPE RYSWTGGEIG FDTYFSMARG
101: NATVPAMEMT KWFDTNYHFI VPELGPNTKF SYASHKAVNE YKEAKALGVD TVPVLIGPVS YLLLSKPAKG VEKGFPLLSL LSSILPVYKE VIAELKAAGA
201: SWIQFDEPTL VLDLDSNKLA AFSAAYAELE SALSGLNVLV ETYFADVPAE SYKTLTSLSG VTAYGFDLVR GTQTLGLVTS AGFPAGKYLF AGVVDGRNIW
301: ADDLATSLST LQSLEAVVGK DKLVVSTSCS LMHTAVDLVN ETKLDSEIKS WLAFAAQKVV EVDALAKALA GQKDEAYFAA NAAAQASRKS SPRVTNEEVQ
401: KAAAALKGSD HRRATTVSAR LDAQQKELNL PVLPTTTIGS FPQTVELRRV RREYKAKKIS EEEYISAIKE EISKVVKLQE ELDIDVLVHG EPERNDMVEY
501: FGEQLSGFAF TANGWVQSYG SRCVKPPIIY GDVSRPNPMT VFWSKTAQSM TSRPMKGMLT GPVTILNWSF VRNDQPRFET CYQIALAIKK EVEDLEAAGI
601: KVIQIDEAAL REGLPLRKAE HAFYLDWAVH SFRITNCEIQ DTTQIHTHMC YSNFNDIIHS IIDMDADVIT IENSRSDEKL LSVFREGVKY GAGIGPGVYD
701: IHSPRIPSTE EIADRVNKML AVLDTNILWV NPDCGLKTRK YAEVKPALTN MVSAAKLIRT QLASAK

Best Arabidopsis Sequence Match ( AT5G17920.2 )
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKST AEDLQKVSAD LRSSIWKQMS AAGTKFIPSN TFAHYDQVLD TTAMLGAVPP RYGYTGGEIG LDVYFSMARG
101: NASVPAMEMT KWFDTNYHYI VPELGPEVNF SYASHKAVNE YKEAKALGVD TVPVLVGPVS YLLLSKAAKG VDKSFELLSL LPKILPIYKE VITELKAAGA
201: TWIQLDEPVL VMDLEGQKLQ AFTGAYAELE STLSGLNVLV ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTLDLVKA GFPEGKYLFA GVVDGRNIWA
301: NDFAASLSTL QALEGIVGKD KLVVSTSCSL LHTAVDLINE TKLDDEIKSW LAFAAQKVVE VNALAKALAG QKDEALFSAN AAALASRRSS PRVTNEGVQK
401: AAAALKGSDH RRATNVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKVSE EDYVKAIKEE IKKVVDLQEE LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKAMTV FWSAMAQSMT SRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG
601: VIQIDEAALR EGLPLRKSEH AFYLDWAVHS FRITNCGVQD STQIHTHMCY SHFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSSEE IADRVNKMLA VLEQNILWVN PDCGLKTRKY TEVKPALKNM VDAAKLIRSQ LASAK

Arabidopsis Description

MS15-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O50008]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.