Factsheet for TraesCS5A01G024900.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G031300.2	Wheat	golgi, mitochondrion, nucleus, plasma membrane, unclear	94.92	99.48
TraesCS5B01G022800.4	Wheat	extracellular, golgi, plastid, unclear	94.3	98.58
HORVU5Hr1G006780.7	Barley	cytosol	53.9	93.15
TraesCS4A01G298700.1	Wheat	cytosol	87.98	92.69
GSMUA_Achr4P22700_001	Banana	cytosol	73.85	88.96
GSMUA_Achr7P01530_001	Banana	cytosol	83.89	88.38
GSMUA_Achr5P02740_001	Banana	cytosol	72.99	87.91
CDY38470	Canola	cytosol	82.9	87.45
Solyc10g081510.1.1	Tomato	extracellular	82.65	87.19
CDX85436	Canola	cytosol	82.65	87.19
Bra023645.1-P	Field mustard	cytosol	82.53	87.06
Bra002116.1-P	Field mustard	cytosol	82.53	87.06
CDY25477	Canola	cytosol	82.53	87.06
CDY02674	Canola	cytosol	82.53	87.06
AT5G17920.1	Thale cress	cytosol	82.4	86.93
CDX78767	Canola	cytosol	82.4	86.93
Bra006429.1-P	Field mustard	cytosol	82.28	86.8
PGSC0003DMT400072279	Potato	cytosol, extracellular	82.16	86.67
CDX70785	Canola	cytosol	82.16	86.67
KRH06666	Soybean	nucleus	81.91	86.63
KRG94871	Soybean	cytosol	81.54	86.24
AT3G03780.2	Thale cress	cytosol	81.66	86.14
CDX74207	Canola	cytosol	81.41	85.88
CDX92051	Canola	cytosol	81.16	85.62
PGSC0003DMT400022467	Potato	cytosol	80.92	85.36
CDY50662	Canola	cytosol	78.56	84.2
KRH04756	Soybean	cytosol, endoplasmic reticulum, nucleus	79.43	83.79
KRH57885	Soybean	cytosol	79.31	83.66
GSMUA_Achr4P21470_001	Banana	mitochondrion	84.01	83.39
Bra001090.1-P	Field mustard	cytosol	81.04	82.89
KRG89918	Soybean	endoplasmic reticulum	80.79	81.6
KRH17939	Soybean	nucleus	81.16	81.57
KRH04805	Soybean	plastid	42.26	81.38
Solyc01g009180.2.1	Tomato	plastid	81.91	80.91
KRH63013	Soybean	cytosol	10.53	74.56
KRH04804	Soybean	endoplasmic reticulum	32.71	73.54
CDX88830	Canola	mitochondrion	73.98	73.25
CDX70955	Canola	mitochondrion	73.98	73.25
Bra006589.1-P	Field mustard	mitochondrion, plastid	73.85	73.13
AT5G20980.2	Thale cress	mitochondrion	73.11	72.66
KRH04683	Soybean	mitochondrion	23.79	68.82
CDX92419	Canola	plastid	73.73	67.92
CDY16584	Canola	plastid	73.23	62.54
KRH04746	Soybean	plastid	12.27	56.9

Protein Annotations

KEGG:00270+2.1.1.14	KEGG:00450+2.1.1.14	Gene3D:3.20.20.210	MapMan:4.1.2.2.6.2.1	InterPro:Cbl-indep_Met_Synth_N	InterPro:Cobalamin-indep_Met_synthase
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0003871	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0008652	GO:GO:0009058	GO:GO:0009086	GO:GO:0009987
GO:GO:0016740	InterPro:IPR038071	HAMAP:MF_00172	InterPro:Met_Synth_C/arc	PFAM:PF01717	PFAM:PF08267
PIRSF:PIRSF000382	PANTHER:PTHR30519	PANTHER:PTHR30519:SF11	SUPFAM:SSF51726	TIGRFAMs:TIGR01371	EnsemblPlantsGene:TraesCS5A01G024900
EnsemblPlants:TraesCS5A01G024900.2	InterPro:UROD/MetE-like_sf	TIGR:cd03311	TIGR:cd03312	SEG:seg	:

Description

No Description!

Coordinates

chr5A:-:19268602..19273335

Molecular Weight (calculated)

89247.8 Da

IEP (calculated)

6.350

GRAVY (calculated)

-0.150

Length

807 amino acids

Sequence
(BLAST)

001: MLCLLGAQPS GSGSDPEPRG FSPRLYYSVR WRFICLLLVH GKMASHIVGY PRMGPKRELK FALESFWDGK SSAEDLEKVA TDLRASIWKQ MADAGIKYIP
101: SNTFSYYDQV LDTTAMLGAV PDRYSWTGGE INLSTYFSMA RGNATVPAME MTKWFDTNYH FIVPELAPST KFSYSSHKAI NEYKEAKALG VDTVPVLVGP
201: VSYLLLSKAA KGVEKSFSPL SLLSSILPVY KEVIAELKAA GASWIQFDEP TLVKDLESHQ LSAFSAAYAE LESALSGLNV LVETYFADVP ADSYKTLTSL
301: SSVTAYGFDL ERGTKTLELV KSGFPAGKYL FAGVVDGRNI WADDLAASLA TLQSLEAVVG KDKLVVSTSC SLMHTAVDLV NETKLDDEIK SWLAFAAQKV
401: VEVNALAKAL AGQKDEAYFA ANAAALASRR SSPRVTNEEV QKAATALKGS DHRRATTVSA RLDAQQKKLN LPVLPTTTIG SFPQTVELRR VRREYKAKKI
501: SEEEYTNAIK EEISKVVKIQ EELDIDVLVH GEPERNDMVE YFGEQLSGFT FTANGWVQSY GSRCVKPPII YGDVSRPNPM TVFWSKMAQS MTARPMKGML
601: TGPVTILNWS FVRNDQPRFE TCYQIALAIK KEVEDLEAGG IQVIQIDEAA LREGLPLRKS EHAFYLDWAV HSFRITNCGV QDTTQIHTHM CYSNFNDIIQ
701: SIINMDADVI TIENSRSDEK LLSVFREGVV YGAGIGPGVY DIHSPRIPSK EEIADRVNKM LAVLDTNILW VNPDCGLKTR KYAEVKPALT NMVEAAKQIR
801: AELAKAQ

Best Arabidopsis Sequence Match ( AT5G17920.2 )
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKST AEDLQKVSAD LRSSIWKQMS AAGTKFIPSN TFAHYDQVLD TTAMLGAVPP RYGYTGGEIG LDVYFSMARG
101: NASVPAMEMT KWFDTNYHYI VPELGPEVNF SYASHKAVNE YKEAKALGVD TVPVLVGPVS YLLLSKAAKG VDKSFELLSL LPKILPIYKE VITELKAAGA
201: TWIQLDEPVL VMDLEGQKLQ AFTGAYAELE STLSGLNVLV ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTLDLVKA GFPEGKYLFA GVVDGRNIWA
301: NDFAASLSTL QALEGIVGKD KLVVSTSCSL LHTAVDLINE TKLDDEIKSW LAFAAQKVVE VNALAKALAG QKDEALFSAN AAALASRRSS PRVTNEGVQK
401: AAAALKGSDH RRATNVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKVSE EDYVKAIKEE IKKVVDLQEE LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKAMTV FWSAMAQSMT SRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG
601: VIQIDEAALR EGLPLRKSEH AFYLDWAVHS FRITNCGVQD STQIHTHMCY SHFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSSEE IADRVNKMLA VLEQNILWVN PDCGLKTRKY TEVKPALKNM VDAAKLIRSQ LASAK

Arabidopsis Description

MS15-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O50008]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.