Factsheet for Zm00001d013644_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

extracellular: 22192489

msms PMID: 22192489 doi

K Witzel, M Shahzad, A Matros, HP Mock, KH Mühling

Institute of Plant Nutrition and Soil Science, Christian Albrechts University, Hermann-Rodewald-Strasse 2, 24118 Kiel, Germany. khmuehling@plantnutrition.uni-kiel.de.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37902	Sorghum	cytosol	94.23	98.17
Zm00001d033480_P002	Maize	extracellular	93.85	97.78
HORVU4Hr1G002270.3	Barley	cytosol	90.59	94.26
TraesCS4A01G298700.1	Wheat	cytosol	90.21	93.86
Zm00001d031128_P004	Maize	plasma membrane, plastid	88.33	91.91
GSMUA_Achr5P02740_001	Banana	cytosol	74.78	88.96
GSMUA_Achr4P22700_001	Banana	cytosol	74.4	88.51
GSMUA_Achr7P01530_001	Banana	cytosol	84.57	87.99
Solyc10g081510.1.1	Tomato	extracellular	84.32	87.84
TraesCS4B01G014700.2	Wheat	vacuole	90.59	87.41
PGSC0003DMT400072279	Potato	cytosol, extracellular	83.81	87.32
CDX85436	Canola	cytosol	83.69	87.19
CDY38470	Canola	cytosol	83.69	87.19
Bra002116.1-P	Field mustard	cytosol	83.56	87.06
CDY02674	Canola	cytosol	83.56	87.06
CDY25477	Canola	cytosol	83.56	87.06
Bra023645.1-P	Field mustard	cytosol	83.56	87.06
TraesCS4D01G012900.1	Wheat	mitochondrion	90.21	87.05
CDX78767	Canola	cytosol	83.44	86.93
AT5G17920.1	Thale cress	cytosol	83.44	86.93
Bra006429.1-P	Field mustard	cytosol	83.31	86.8
CDX70785	Canola	cytosol	83.19	86.67
AT3G03780.2	Thale cress	cytosol	83.06	86.54
PGSC0003DMT400022467	Potato	cytosol	82.94	86.41
CDX74207	Canola	cytosol	82.81	86.27
KRG94871	Soybean	cytosol	82.43	86.11
KRH06666	Soybean	nucleus	82.18	85.85
CDX92051	Canola	cytosol	82.31	85.75
KRH57885	Soybean	cytosol	81.81	85.23
KRH04756	Soybean	cytosol, endoplasmic reticulum, nucleus	81.43	84.84
CDY50662	Canola	cytosol	79.8	84.46
GSMUA_Achr4P21470_001	Banana	mitochondrion	85.07	83.39
Bra001090.1-P	Field mustard	cytosol	82.43	83.27
KRH04805	Soybean	plastid	43.41	82.58
KRG89918	Soybean	endoplasmic reticulum	82.69	82.48
KRH17939	Soybean	nucleus	82.94	82.32
Solyc01g009180.2.1	Tomato	plastid	83.94	81.88
KRH63013	Soybean	cytosol	11.42	79.82
KRH04804	Soybean	endoplasmic reticulum	33.38	74.09
CDX70955	Canola	mitochondrion	75.28	73.62
Bra006589.1-P	Field mustard	mitochondrion, plastid	75.16	73.5
CDX88830	Canola	mitochondrion	75.16	73.5
AT5G20980.2	Thale cress	mitochondrion	74.78	73.4
KRH04683	Soybean	mitochondrion	24.59	70.25
CDX92419	Canola	plastid	74.91	68.15
CDY16584	Canola	plastid	74.66	62.96
KRH04746	Soybean	plastid	12.55	57.47
VIT_10s0042g00970.t01	Wine grape	cytosol	14.05	40.88

Protein Annotations

KEGG:00270+2.1.1.14	KEGG:00450+2.1.1.14	Gene3D:3.20.20.210	MapMan:4.1.2.2.6.2.1	EntrezGene:541714	UniProt:A0A1D6GL75
ProteinID:AQK64071.1	InterPro:Cbl-indep_Met_Synth_N	InterPro:Cobalamin-indep_Met_synthase	GO:GO:0003674	GO:GO:0003824	GO:GO:0003871
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270	GO:GO:0008652
GO:GO:0009058	GO:GO:0009086	GO:GO:0009987	GO:GO:0016740	GO:GO:0032259	InterPro:IPR038071
HAMAP:MF_00172	InterPro:Met_Synth_C/arc	PFAM:PF01717	PFAM:PF08267	PIRSF:PIRSF000382	PANTHER:PTHR30519
PANTHER:PTHR30519:SF11	SUPFAM:SSF51726	TIGRFAMs:TIGR01371	UniParc:UPI000842B182	InterPro:UROD/MetE-like_sf	EnsemblPlantsGene:Zm00001d013644
EnsemblPlants:Zm00001d013644_P001	EnsemblPlants:Zm00001d013644_T001	SEG:seg	:	:	:

Description

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1

Coordinates

chr5:-:16104795..16109870

Molecular Weight (calculated)

88503.0 Da

IEP (calculated)

6.625

GRAVY (calculated)

-0.155

Length

797 amino acids

Sequence
(BLAST)

001: MKFRPQNFVS SRTGFPKLLL HLLENLEFLH RKMASHIVGY PRMGPKRELK FALESFWDGK SSAEDLEKVA TDLRSSIWKQ MSEAGIKYIP SNTFSYYDQV
101: LDTTAMLGAV PERYSWTGGE IGLSTYFSMA RGNATVPAME MTKWFDTNYH FIVPELGPST KFTYASHKAV SEYKEAKALG IDTVPVLVGP VSYLLLSKPA
201: KGVEKSFSLL SLLGSILPIY KEVVAELKAA GASWIQLDEP TLVKDLDAHE LAAFSSAYAE LESSFSGLNV LIETYFADIP AESYKTLTSL SGVTAYGFDL
301: IRGAKTLDLI RSSFPSGKYL FAGVVDGRNI WADDLAASLS TLHSLEAVAG KDKLVVSTSC SLMHTAVDLV NETKLDDEIK SWLAFAAQKV VEVNALAKAL
401: AGQKDEVYFA ANAAAQASRR SSPRVTNEEV QKAAAALRGS DHRRSTTVSA RLDAQQKKLN LPVLPTTTIG SFPQTVELRR VRREYKAKKI TEDEYISAIK
501: EEISKVVKIQ EELDIDVLVH GEPERNDMVE YFGEQLSGFA FTANGWVQSY GSRCVKPPII YGDVSRPNPM TVFWSKMAQS MTPRPMKGML TGPVTILNWS
601: FVRNDQPRFE TCYQIALAIK KEVEDLEAAG IQVIQIDEAA LREGLPLRKS EHAFYLDWAV HSFRITNCGV QDTTQIHTHM CYSNFNDIIH SIIDMDADVI
701: TIENSRSDEK LLSVFREGVK YGAGIGPGVY DIHSPRIPST EEIADRVEKM LAVLDTNILW VNPDCGLKTR KYTEVKPALT NMVSATKLIR TQLASAK

Best Arabidopsis Sequence Match ( AT5G17920.2 )
(BLAST)

001: MASHIVGYPR MGPKRELKFA LESFWDGKST AEDLQKVSAD LRSSIWKQMS AAGTKFIPSN TFAHYDQVLD TTAMLGAVPP RYGYTGGEIG LDVYFSMARG
101: NASVPAMEMT KWFDTNYHYI VPELGPEVNF SYASHKAVNE YKEAKALGVD TVPVLVGPVS YLLLSKAAKG VDKSFELLSL LPKILPIYKE VITELKAAGA
201: TWIQLDEPVL VMDLEGQKLQ AFTGAYAELE STLSGLNVLV ETYFADIPAE AYKTLTSLKG VTAFGFDLVR GTKTLDLVKA GFPEGKYLFA GVVDGRNIWA
301: NDFAASLSTL QALEGIVGKD KLVVSTSCSL LHTAVDLINE TKLDDEIKSW LAFAAQKVVE VNALAKALAG QKDEALFSAN AAALASRRSS PRVTNEGVQK
401: AAAALKGSDH RRATNVSARL DAQQKKLNLP ILPTTTIGSF PQTVELRRVR REYKAKKVSE EDYVKAIKEE IKKVVDLQEE LDIDVLVHGE PERNDMVEYF
501: GEQLSGFAFT ANGWVQSYGS RCVKPPVIYG DVSRPKAMTV FWSAMAQSMT SRPMKGMLTG PVTILNWSFV RNDQPRHETC YQIALAIKDE VEDLEKGGIG
601: VIQIDEAALR EGLPLRKSEH AFYLDWAVHS FRITNCGVQD STQIHTHMCY SHFNDIIHSI IDMDADVITI ENSRSDEKLL SVFREGVKYG AGIGPGVYDI
701: HSPRIPSSEE IADRVNKMLA VLEQNILWVN PDCGLKTRKY TEVKPALKNM VDAAKLIRSQ LASAK

Arabidopsis Description

MS15-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:O50008]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.