Factsheet for Bra015721.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000943.1-P
Bra006216.1-P
Bra007233.1-P
Bra008801.1-P
Bra019468.1-P
Bra037384.1-P
Bra037396.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G76760.1	Bra019468.1-P	AT3G44720.1	21798944
AT1G76760.1	Bra007233.1-P	AT3G56270.1	21798944
AT1G76760.1	Bra037396.1-P	AT4G00980.1	21798944
AT1G76760.1	Bra000943.1-P	AT4G01090.1	21798944
AT1G76760.1	Bra037384.1-P	AT4G01090.1	21798944
AT1G76760.1	Bra006216.1-P	AT5G13810.1	21798944
AT1G76760.1	Bra008801.1-P	AT5G13810.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87569	Canola	plastid	97.67	97.67
AT1G76760.1	Thale cress	plastid	82.56	82.56
HORVU7Hr1G010470.2	Barley	cytosol	30.81	71.62
Os01t0963400-01	Rice	cytosol	48.84	68.85
HORVU2Hr1G087710.1	Barley	cytosol	31.98	67.07
PGSC0003DMT400061915	Potato	cytosol, plastid	61.05	61.76
KRG91663	Soybean	plastid	61.05	60.0
Solyc04g071560.2.1	Tomato	plastid	60.47	59.77
VIT_18s0072g00400.t01	Wine grape	plastid	59.88	58.86
KRH35133	Soybean	plastid	58.14	57.14
GSMUA_Achr6P25720_001	Banana	plastid	54.65	55.29
GSMUA_Achr1P13230_001	Banana	extracellular	41.28	52.59
Zm00001d042017_P002	Maize	plastid	50.0	51.5
EES02107	Sorghum	plastid	51.16	51.46
TraesCS3B01G577800.1	Wheat	plastid	48.26	50.61
TraesCS3A01G509000.1	Wheat	plastid	48.26	50.3
TraesCS3D01G516800.1	Wheat	plastid	47.67	49.7
HORVU5Hr1G116290.1	Barley	plastid	37.79	46.76
HORVU3Hr1G111930.2	Barley	plastid	50.0	41.55
Bra001592.1-P	Field mustard	extracellular, plasma membrane	25.58	26.99
Bra027250.1-P	Field mustard	plastid	29.07	26.04
Bra000821.1-P	Field mustard	plastid	26.16	25.0
Bra015223.1-P	Field mustard	plastid	24.42	24.56
Bra018842.1-P	Field mustard	plastid	25.58	24.18
Bra034214.1-P	Field mustard	plastid	25.0	23.37
Bra019005.1-P	Field mustard	extracellular	13.95	17.39
Bra032547.1-P	Field mustard	plastid	23.84	12.24

Protein Annotations

MapMan:10.5.8	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra015721	EnsemblPlants:Bra015721.1	EnsemblPlants:Bra015721.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006662
GO:GO:0008047	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009987	GO:GO:0015035	GO:GO:0016671	GO:GO:0019725	GO:GO:0030234	GO:GO:0043085
GO:GO:0045454	GO:GO:0055114	InterPro:IPR013766	UniProt:M4DGU5	PFAM:PF00085	PRINTS:PR00421
ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF280	SUPFAM:SSF52833	TIGRFAMs:TIGR01068
InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI0002541A23	SEG:seg

Description

AT1G76760 (E=5e-071) ATY1, TRX-Y1 | ATY1 (ARABIDOPSIS THIOREDOXIN Y1); electron carrier/ protein disulfide oxidoreductase

Coordinates

chrA07:-:21179981..21181201

Molecular Weight (calculated)

19052.8 Da

IEP (calculated)

8.460

GRAVY (calculated)

-0.176

Length

172 amino acids

Sequence
(BLAST)

001: MAATSFSPST IPSLNRKGSS TVSALAPRSI SAVKFQFPLR RIRTGDLSLS SLSSSTRSTP RPIEAKKQTY NSFDDLLVNS DKPVLVDFYA TWCGPCQFMV
101: PILSEVSETL KDKIQVVKID TEKYPSIANK YKIEALPTLI LFKDGEPCDR FEGALAANQL VQWIEDSLEV KT

Best Arabidopsis Sequence Match ( AT1G76760.1 )
(BLAST)

001: MASISLSSST VPSLNSKESS GVSAFASRSI SAVKFQFPVR RVRTGDLKFP SLSSTTRCTP RRIEAKKQTF DSFEDLLVNS DKPVLVDYYA TWCGPCQFMV
101: PILNEVSETL KDKIQVVKID TEKYPSIANK YKIEALPTFI LFKDGEPCDR FEGALTAKQL IQRIEDSLKV KP

Arabidopsis Description

ATY1TY1 [Source:UniProtKB/TrEMBL;Acc:A0A178WE50]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.