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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88314 Canola plastid 84.88 84.88
Bra015721.1-P Field mustard plastid 82.56 82.56
CDX87569 Canola plastid 81.98 81.98
HORVU7Hr1G010470.2 Barley cytosol 31.4 72.97
HORVU2Hr1G087710.1 Barley cytosol 33.14 69.51
Os01t0963400-01 Rice cytosol 48.84 68.85
VIT_18s0072g00400.t01 Wine grape plastid 63.37 62.29
AT1G43560.1 Thale cress plastid 60.47 62.28
PGSC0003DMT400061915 Potato cytosol, plastid 61.05 61.76
KRG91663 Soybean plastid 62.79 61.71
Solyc04g071560.2.1 Tomato plastid 61.05 60.34
KRH35133 Soybean plastid 61.05 60.0
GSMUA_Achr6P25720_001 Banana plastid 55.23 55.88
GSMUA_Achr1P13230_001 Banana extracellular 43.6 55.56
Zm00001d042017_P002 Maize plastid 51.16 52.69
EES02107 Sorghum plastid 52.33 52.63
TraesCS3D01G516800.1 Wheat plastid 48.26 50.3
TraesCS3B01G577800.1 Wheat plastid 47.67 50.0
TraesCS3A01G509000.1 Wheat plastid 47.67 49.7
HORVU5Hr1G116290.1 Barley plastid 37.79 46.76
HORVU3Hr1G111930.2 Barley plastid 49.42 41.06
AT1G50320.1 Thale cress plastid 27.91 26.37
AT3G15360.1 Thale cress plastid 27.91 24.87
AT2G15570.2 Thale cress plastid 25.0 24.71
AT1G03680.1 Thale cress plastid 23.84 22.91
AT4G12170.1 Thale cress extracellular 19.19 21.57
AT4G03520.1 Thale cress plastid 23.26 21.51
Protein Annotations
MapMan:10.5.8Gene3D:3.40.30.10EntrezGene:844010UniProt:A0A178WE50ProteinID:AAF04439.1ProteinID:AEE35886.1
EMBL:AK227422ArrayExpress:AT1G76760EnsemblPlantsGene:AT1G76760RefSeq:AT1G76760TAIR:AT1G76760RefSeq:AT1G76760-TAIR-G
EnsemblPlants:AT1G76760.1TAIR:AT1G76760.1Symbol:ATY1EMBL:BT010677EMBL:BT010965GO:GO:0003674
GO:GO:0003824GO:GO:0004791GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0006662GO:GO:0006950GO:GO:0008047GO:GO:0008150GO:GO:0008152GO:GO:0009507
GO:GO:0009536GO:GO:0009570GO:GO:0009987GO:GO:0015035GO:GO:0016671GO:GO:0019725
GO:GO:0030234GO:GO:0034599GO:GO:0043085GO:GO:0045454GO:GO:0047134GO:GO:0055114
GO:GO:0098869InterPro:IPR013766RefSeq:NP_177802.2ProteinID:OAP15765.1PFAM:PF00085PO:PO:0000013
PO:PO:0000037PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001016PO:PO:0001017
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025195PO:PO:0025281PRINTS:PR00421ScanProsite:PS00194PFscan:PS51352
PANTHER:PTHR10438PANTHER:PTHR10438:SF280UniProt:Q6NPF9SUPFAM:SSF52833TIGRFAMs:TIGR01068InterPro:Thioredoxin
InterPro:Thioredoxin-like_sfInterPro:Thioredoxin_CSInterPro:Thioredoxin_domainUniParc:UPI000022004ASEG:seg:
Description
ATY1TY1 [Source:UniProtKB/TrEMBL;Acc:A0A178WE50]
Coordinates
chr1:-:28811685..28813164
Molecular Weight (calculated)
19251.2 Da
IEP (calculated)
9.206
GRAVY (calculated)
-0.238
Length
172 amino acids
Sequence
(BLAST)
001: MASISLSSST VPSLNSKESS GVSAFASRSI SAVKFQFPVR RVRTGDLKFP SLSSTTRCTP RRIEAKKQTF DSFEDLLVNS DKPVLVDYYA TWCGPCQFMV
101: PILNEVSETL KDKIQVVKID TEKYPSIANK YKIEALPTFI LFKDGEPCDR FEGALTAKQL IQRIEDSLKV KP
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.