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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY42508 Canola plastid 78.57 79.44
Bra018842.1-P Field mustard plastid 78.57 78.57
CDY22789 Canola plastid 78.02 78.02
VIT_10s0042g00430.t01 Wine grape cytosol 31.32 67.06
VIT_10s0042g00200.t01 Wine grape plastid 53.85 55.68
KRH36129 Soybean plastid 53.3 55.11
KRG90625 Soybean plastid 54.4 54.7
Solyc01g008250.2.1 Tomato plastid 52.2 52.2
PGSC0003DMT400042164 Potato cytosol, plastid 51.1 50.54
Os04t0676100-01 Rice extracellular, plastid 47.25 47.78
Zm00001d001843_P001 Maize plastid 45.05 46.33
EES11645 Sorghum plastid 44.51 46.29
TraesCS2A01G555300.1 Wheat plastid 43.41 45.93
GSMUA_Achr2P03790_001 Banana plastid 44.51 45.51
TraesCS2B01G588600.1 Wheat plastid 43.41 45.14
TraesCS2D01G559200.1 Wheat plastid 42.86 45.09
Zm00001d026608_P001 Maize plastid 42.31 44.0
AT1G76760.1 Thale cress plastid 26.37 27.91
AT1G43560.1 Thale cress plastid 25.27 27.54
AT1G03680.1 Thale cress plastid 23.63 24.02
AT3G15360.1 Thale cress plastid 25.27 23.83
AT4G03520.1 Thale cress plastid 24.18 23.66
AT2G15570.2 Thale cress plastid 21.98 22.99
AT4G12170.1 Thale cress extracellular 18.68 22.22
Protein Annotations
MapMan:10.5.6Gene3D:3.40.30.10EntrezGene:841454UniProt:A0A178W3U7ProteinID:AAD50039.1ProteinID:AEE32536.1
EMBL:AF095753EMBL:AF324698EMBL:AF326860EMBL:AF339683EMBL:AF386924ArrayExpress:AT1G50320
EnsemblPlantsGene:AT1G50320RefSeq:AT1G50320TAIR:AT1G50320RefSeq:AT1G50320-TAIR-GEnsemblPlants:AT1G50320.1TAIR:AT1G50320.1
Symbol:ATHXEMBL:AY086205Unigene:At.11799EMBL:BT000355GO:GO:0003674GO:GO:0003824
GO:GO:0004791GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006662
GO:GO:0006950GO:GO:0008047GO:GO:0008150GO:GO:0008152GO:GO:0009507GO:GO:0009536
GO:GO:0009570GO:GO:0009987GO:GO:0015035GO:GO:0016671GO:GO:0019725GO:GO:0030234
GO:GO:0034599GO:GO:0043085GO:GO:0045454GO:GO:0047134GO:GO:0055114GO:GO:0098869
InterPro:IPR013766RefSeq:NP_564566.1ProteinID:OAP12381.1PFAM:PF00085PO:PO:0000013PO:PO:0000037
PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PRINTS:PR00421PFscan:PS51352
PANTHER:PTHR10438PANTHER:PTHR10438:SF270UniProt:Q8LD49SUPFAM:SSF52833InterPro:ThioredoxinInterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domainUniParc:UPI00000AC075::::
Description
ATHXThioredoxin X, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LD49]
Coordinates
chr1:-:18638384..18639536
Molecular Weight (calculated)
19648.8 Da
IEP (calculated)
9.197
GRAVY (calculated)
0.035
Length
182 amino acids
Sequence
(BLAST)
001: MDSIVSSSTI LMRSYLTPPV RSCSPATSVS VKPLSSVQVT SVAANRHLLS LSSGARRTRK SSSSVIRCGG IKEIGESEFS STVLESAQPV LVEFVATWCG
101: PCKLIYPAME ALSQEYGDKL TIVKIDHDAN PKLIAEFKVY GLPHFILFKD GKEVPGSRRE GAITKAKLKE YIDGLLNSIS VA
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.