Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 11
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG91663 | Soybean | plastid | 94.29 | 94.29 |
| CDY14949 | Canola | cytosol | 48.0 | 73.04 |
| Os01t0963400-01 | Rice | cytosol | 48.57 | 69.67 |
| VIT_18s0072g00400.t01 | Wine grape | plastid | 69.14 | 69.14 |
| HORVU7Hr1G010470.2 | Barley | cytosol | 28.0 | 66.22 |
| HORVU2Hr1G087710.1 | Barley | cytosol | 29.71 | 63.41 |
| AT1G76760.1 | Thale cress | plastid | 60.0 | 61.05 |
| PGSC0003DMT400061915 | Potato | cytosol, plastid | 58.29 | 60.0 |
| AT1G43560.1 | Thale cress | plastid | 56.57 | 59.28 |
| CDX88314 | Canola | plastid | 57.71 | 58.72 |
| Bra015721.1-P | Field mustard | plastid | 57.14 | 58.14 |
| CDX87569 | Canola | plastid | 57.14 | 58.14 |
| Solyc04g071560.2.1 | Tomato | plastid | 57.71 | 58.05 |
| EES02107 | Sorghum | plastid | 54.29 | 55.56 |
| Zm00001d042017_P002 | Maize | plastid | 52.57 | 55.09 |
| GSMUA_Achr6P25720_001 | Banana | plastid | 52.0 | 53.53 |
| GSMUA_Achr1P13230_001 | Banana | extracellular | 41.14 | 53.33 |
| TraesCS3D01G516800.1 | Wheat | plastid | 50.29 | 53.33 |
| TraesCS3A01G509000.1 | Wheat | plastid | 50.29 | 53.33 |
| TraesCS3B01G577800.1 | Wheat | plastid | 49.14 | 52.44 |
| HORVU5Hr1G116290.1 | Barley | plastid | 36.57 | 46.04 |
| HORVU3Hr1G111930.2 | Barley | plastid | 48.0 | 40.58 |
| KRH53365 | Soybean | plastid | 25.71 | 24.86 |
| KRH55312 | Soybean | nucleus, plastid | 24.0 | 24.85 |
| KRH22105 | Soybean | plastid | 25.71 | 24.73 |
| KRH50300 | Soybean | plastid | 24.57 | 24.71 |
| KRH36129 | Soybean | plastid | 24.57 | 24.43 |
| KRH64566 | Soybean | plastid | 25.14 | 24.31 |
| KRG90625 | Soybean | plastid | 25.14 | 24.31 |
| KRH70646 | Soybean | plastid | 23.43 | 24.26 |
| KRH27229 | Soybean | plastid | 25.14 | 24.18 |
| KRH26086 | Soybean | plastid | 23.43 | 23.43 |
| KRH18101 | Soybean | plastid | 12.57 | 23.16 |
| KRH15927 | Soybean | plastid | 16.57 | 22.83 |
Protein Annotations
| MapMan:10.5.8 | EntrezGene:100306580 | Gene3D:3.40.30.10 | EMBL:ACUP02006651 | EMBL:BT090749 | UniProt:C6SZZ6 |
| EnsemblPlantsGene:GLYMA_10G224100 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004791 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006662 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0015035 | GO:GO:0016671 | GO:GO:0019725 | GO:GO:0034599 | GO:GO:0045454 |
| GO:GO:0047134 | GO:GO:0055114 | GO:GO:0098869 | InterPro:IPR013766 | EnsemblPlants:KRH35133 | ProteinID:KRH35133 |
| ProteinID:KRH35133.1 | PFAM:PF00085 | PRINTS:PR00421 | ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR10438 |
| PANTHER:PTHR10438:SF280 | SUPFAM:SSF52833 | TIGRFAMs:TIGR01068 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS |
| InterPro:Thioredoxin_domain | UniParc:UPI0001B1523C | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:45494198..45496872
Molecular Weight (calculated)
19432.3 Da
IEP (calculated)
9.430
GRAVY (calculated)
-0.199
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVSVSASSA IASLNSERST RLAPSLVSAS SSAKQSSLQF TSPTRLLRIS TPRAPAPSRP RFLPLVQAKK QTYNSFEDLL ANSEKPVLVD FYATWCGPCQ
101: FMVPILNEVS TRLQDKIQVV KIDTEKYPTI ADKYRIEALP TFIMFKDGDP YDRFEGALTA DQLIERIEAG LKVKQ
101: FMVPILNEVS TRLQDKIQVV KIDTEKYPTI ADKYRIEALP TFIMFKDGDP YDRFEGALTA DQLIERIEAG LKVKQ
001: MAISLATAYI SPCFTPESSN SASPSRTLSS VRLPSQIRRF GSVQSPSSST RFAPLTVRAA KKQTFNSFDD LLQNSDKPVL VDFYATWCGP CQLMVPILNE
101: VSETLKDIIA VVKIDTEKYP SLANKYQIEA LPTFILFKDG KLWDRFEGAL PANQLVERIE NSLQVKQ
101: VSETLKDIIA VVKIDTEKYP SLANKYQIEA LPTFILFKDG KLWDRFEGAL PANQLVERIE NSLQVKQ
Arabidopsis Description
Aty2Ty2 [Source:UniProtKB/TrEMBL;Acc:A0A178WFY2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.