CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 2
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05441	Soybean	cytosol	77.05	78.44
KRH15569	Soybean	vacuole	79.0	77.08
KRH15559	Soybean	cytosol	46.8	74.5
KRH15564	Soybean	mitochondrion	24.38	61.99
KRH08807	Soybean	cytosol, nucleus, vacuole	22.6	59.62
AT5G11920.1	Thale cress	cytosol	52.14	53.27
CDX97155	Canola	peroxisome, plastid, vacuole	51.42	53.03
Bra008926.1-P	Field mustard	mitochondrion, vacuole	48.58	53.01
CDX69719	Canola	mitochondrion, peroxisome, plastid, vacuole	51.25	52.94
KRH44130	Soybean	vacuole	52.31	52.13
KRH47104	Soybean	nucleus	51.96	51.77
KRH23303	Soybean	nucleus	52.31	51.22
KRH10019	Soybean	nucleus, vacuole	52.14	50.96
KRH44129	Soybean	vacuole	45.55	49.81
KRG89527	Soybean	vacuole	48.04	48.65
CDX70431	Canola	cytosol	15.3	48.31
KRG89524	Soybean	cytosol	35.94	48.1
KRG89530	Soybean	vacuole	39.15	47.52
KRH32774	Soybean	endoplasmic reticulum, vacuole	48.22	47.05
CDX70432	Canola	cytosol	25.27	46.86
KRH67945	Soybean	vacuole	43.59	45.88
KRG96203	Soybean	vacuole	44.66	45.31
KRG89522	Soybean	cytosol, nucleus, vacuole	23.84	42.81
KRH04082	Soybean	endoplasmic reticulum	41.28	35.97
KRH57351	Soybean	endoplasmic reticulum	41.28	35.97
KRH56348	Soybean	vacuole	41.28	35.91
KRH28036	Soybean	vacuole	39.15	35.54
KRH77397	Soybean	endoplasmic reticulum	41.64	34.67
KRH39981	Soybean	vacuole	38.79	34.6
KRH23803	Soybean	vacuole	37.72	34.53
Bra006129.1-P	Field mustard	cytosol, nucleus, vacuole	46.8	32.88
CDX78455	Canola	cytosol	52.14	29.66
Bra006130.1-P	Field mustard	cytosol	7.3	16.73
CDX70433	Canola	cytosol	9.07	9.34

Protein Annotations

KEGG:00052+3.2.1.26	KEGG:00500+3.2.1.26	EntrezGene:100806220	Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.1
EMBL:ACUP02010745	InterPro:ConA-like_dom_sf	EnsemblPlantsGene:GLYMA_17G227800	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_32
InterPro:Glyco_hydro_32_AS	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf	UniProt:I1MX99	InterPro:IPR023296
EnsemblPlants:KRH05439	ProteinID:KRH05439	ProteinID:KRH05439.1	PFAM:PF00251	PFAM:PF08244	ScanProsite:PS00609
PANTHER:PTHR31953	PANTHER:PTHR31953:SF14	SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005	UniParc:UPI00023DB2A8
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:38275485..38278808

Molecular Weight (calculated)

64424.4 Da

IEP (calculated)

4.866

GRAVY (calculated)

-0.505

Length

562 amino acids

Sequence
(BLAST)

001: MEINGEGASP HSINSIKFKV PEKQPYRTWY HFQPPQNWMN DPNAPMYYKG VYHFFYQHNP YAPTFGEKMV WAHSVSYDLI NWIHLNHAIE PSDSYDINSC
101: WSGSATILPG EEEQPVILYT GIDNNKYQVQ NMAMPKDLSD PFLREWVKHP QNPAMTPPSG VEVNNFRDPS TAWQGKDGKW RVVIGAQNGD EGKTILYQSE
201: DFVNWRVELN PFFATDNTGV CECPDFFPVS INSTNGVDAS VQSQSVRHVL KISYLRRHQD YYFLGKYVYD EGNFVPDVKF TGTSSDLRLD YGKFYASKSF
301: FDHAKNRRIL WGWVNECDTR QNDIEKGWAG LQCIPRQVWL DESGKQLMQW PIEEIEKLRD KQISILGEKL VGGSIIEVSG ITASQADVEV LFELPELENV
401: EWLDESEVDP HLLCSEEYAT RSGTIGPFGL LALASEDQTE HTAVFFRIYR ASNRYICFMC SDQSRSSLRQ DLDKTTYGTI FDIDPNVKTI SLRSLIDRSI
501: IESFGEKGRI CITSRVYPSM SIDKNAHLYV FNNGSQSVVI SELNAWSMKQ AEFGQEESIN KQ

Best Arabidopsis Sequence Match ( AT5G11920.1 )
(BLAST)

001: MADVMEQNLL QTAVLNRTSF HFQPQRNWLN DPNAPMYYKG FYHLFYQNNP LAPEFSRTRI IWGHSVSQDM VNWIQLEPAL VPSESFDINS CWSGSATILP
101: DGRPVILYTG LDVNNKQQVT VVAEPKDVSD PLLREWVKPK YNPVMVPPSN VPFNCFRDPT EAWKGQDGKW RVLIGAKEKD TEKGMAILYR SDDFVQWTKY
201: PVPLLESEGT GMWECPDFFP VSITGKEGVD TSVNNASVRH VLKASFGGND CYVIGKYSSE TEDFSADYEF TNTSADLRYD HGTFYASKAF FDSVKNRRIN
301: WGWVIETDSK EDDFKKGWAG LMTLPREIWM DTSGKKLMQW PIEEINNLRT KSVSLDDCYE FKTGSTFEIS GITAAQADVE VTFNLPFLEN NPEILDADQV
401: DDATLFDRDS SVGCVYGPFG LLALASSDLS EQTAIFFKVI RRGNGYAVVM CSSEKRSSLR DNIKKSSHGA FLDIDPRHEK ISLRCLIDHS IIESYGVGGK
501: TVITSRVYPK LAIGEAAKLY VFNDGENGVI MTSLEAWSMR NAQINSNPTY

Arabidopsis Description

CWINV6Beta-fructofuranosidase, insoluble isoenzyme CWINV6 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4S6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.