CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 2
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15559	Soybean	cytosol	55.25	86.4
KRH05439	Soybean	cytosol	78.44	77.05
KRH15569	Soybean	vacuole	74.28	71.18
KRH08807	Soybean	cytosol, nucleus, vacuole	25.18	65.26
KRH15564	Soybean	mitochondrion	25.91	64.71
Bra008926.1-P	Field mustard	mitochondrion, vacuole	49.82	53.4
AT5G11920.1	Thale cress	cytosol	53.08	53.27
CDX69719	Canola	mitochondrion, peroxisome, plastid, vacuole	52.17	52.94
CDX97155	Canola	peroxisome, plastid, vacuole	51.99	52.66
KRH47104	Soybean	nucleus	53.08	51.95
KRH44130	Soybean	vacuole	52.9	51.77
KRH44129	Soybean	vacuole	47.64	51.17
KRH23303	Soybean	nucleus	51.81	49.83
KRH10019	Soybean	nucleus, vacuole	51.45	49.39
CDX70432	Canola	cytosol	26.81	48.84
KRH32774	Soybean	endoplasmic reticulum, vacuole	50.0	47.92
KRG89524	Soybean	cytosol	35.51	46.67
KRG89527	Soybean	vacuole	46.56	46.31
KRG89530	Soybean	vacuole	38.22	45.57
KRH67945	Soybean	vacuole	43.84	45.32
CDX70431	Canola	cytosol	14.49	44.94
KRG96203	Soybean	vacuole	44.38	44.22
KRG89522	Soybean	cytosol, nucleus, vacuole	24.28	42.81
KRH56348	Soybean	vacuole	43.66	37.31
KRH57351	Soybean	endoplasmic reticulum	42.75	36.59
KRH28036	Soybean	vacuole	40.94	36.51
KRH04082	Soybean	endoplasmic reticulum	42.57	36.43
KRH39981	Soybean	vacuole	41.49	36.35
KRH23803	Soybean	vacuole	40.04	35.99
KRH77397	Soybean	endoplasmic reticulum	43.66	35.7
Bra006129.1-P	Field mustard	cytosol, nucleus, vacuole	47.64	32.88
CDX78455	Canola	cytosol	53.08	29.66
Bra006130.1-P	Field mustard	cytosol	7.43	16.73
CDX70433	Canola	cytosol	8.88	8.97

Protein Annotations

KEGG:00052+3.2.1.26	KEGG:00500+3.2.1.26	EntrezGene:100806753	Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.1
EMBL:ACUP02010745	InterPro:ConA-like_dom_sf	EnsemblPlantsGene:GLYMA_17G227900	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_32
InterPro:Glyco_hydro_32_AS	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf	UniProt:I1MXA0	InterPro:IPR023296
EnsemblPlants:KRH05441	ProteinID:KRH05441	ProteinID:KRH05441.1	PFAM:PF00251	PFAM:PF08244	ScanProsite:PS00609
PANTHER:PTHR31953	PANTHER:PTHR31953:SF14	SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005	UniParc:UPI00023DB2AB
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:38284476..38287851

Molecular Weight (calculated)

63259.4 Da

IEP (calculated)

5.017

GRAVY (calculated)

-0.472

Length

552 amino acids

Sequence
(BLAST)

001: MIMEINASPD NINSVKYNVH EKQPYRTWYH FQPPQNWMND PNGPMYYKGV YHFFYQHNPY APTFGRHMVW GHSVSYDLIN WIHLNHILEP SESYDINGCY
101: SGSITTLPVE KPVIMYTGSD TNKHQIQNLA MPKNLSDPFL REWVKDPQNP IMIPPSGIDV EGFRDPTTAW QGGDGKWRVI IGAKTGDDGK ALLYHSDDFV
201: NWKLHPNPLY ASDNTGMFEC PDFFPVHISG SKSGVDTSIQ NSSVKHVLKM SYQNKQLEYY FLGEYFPDQE KFIPDADWAR TGLDLILDHG MFYASKSFFD
301: NAKKRRILWG WSKECDTTQD DYEKGWAGLQ SIPRQVWLDK SGKWLMQWPI EEVEKLRDKQ VSITGEKLIG GSTIEVSGIT ASQVDVEVLF ELPELENAEW
401: LDESEVDSHL LCSEEYASRS GIIGPFGLLA LASEDQTEHT AIFFRIYRAP NRYLCLMCSD QSRSSLRQDL DKTPYGTIFD IDPNVKTISL RSLIDRSIIE
501: SFGEKGRICI TSRVYPSLAI DKDAHLYVFN NGSQSVVISE LNAWSMKEAE FS

Best Arabidopsis Sequence Match ( AT5G11920.1 )
(BLAST)

001: MADVMEQNLL QTAVLNRTSF HFQPQRNWLN DPNAPMYYKG FYHLFYQNNP LAPEFSRTRI IWGHSVSQDM VNWIQLEPAL VPSESFDINS CWSGSATILP
101: DGRPVILYTG LDVNNKQQVT VVAEPKDVSD PLLREWVKPK YNPVMVPPSN VPFNCFRDPT EAWKGQDGKW RVLIGAKEKD TEKGMAILYR SDDFVQWTKY
201: PVPLLESEGT GMWECPDFFP VSITGKEGVD TSVNNASVRH VLKASFGGND CYVIGKYSSE TEDFSADYEF TNTSADLRYD HGTFYASKAF FDSVKNRRIN
301: WGWVIETDSK EDDFKKGWAG LMTLPREIWM DTSGKKLMQW PIEEINNLRT KSVSLDDCYE FKTGSTFEIS GITAAQADVE VTFNLPFLEN NPEILDADQV
401: DDATLFDRDS SVGCVYGPFG LLALASSDLS EQTAIFFKVI RRGNGYAVVM CSSEKRSSLR DNIKKSSHGA FLDIDPRHEK ISLRCLIDHS IIESYGVGGK
501: TVITSRVYPK LAIGEAAKLY VFNDGENGVI MTSLEAWSMR NAQINSNPTY

Arabidopsis Description

CWINV6Beta-fructofuranosidase, insoluble isoenzyme CWINV6 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4S6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.