CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69719	Canola	mitochondrion, peroxisome, plastid, vacuole	62.36	20.4
CDX97155	Canola	peroxisome, plastid, vacuole	61.8	20.18
CDX95352	Canola	vacuole	42.13	16.41
KRH05439	Soybean	cytosol	48.31	15.3
CDY23643	Canola	vacuole	44.38	14.91
KRH05441	Soybean	cytosol	44.94	14.49
CDY37487	Canola	vacuole	47.19	14.38
CDX97519	Canola	vacuole	47.19	14.38
CDY51739	Canola	vacuole	47.19	14.36
CDY33067	Canola	vacuole	46.63	14.34
CDY24053	Canola	vacuole	46.63	14.34
KRH15569	Soybean	vacuole	46.07	14.24
VIT_04s0008g01150.t01	Wine grape	vacuole	45.51	14.19
CDY23644	Canola	vacuole	47.19	13.88
CDX97518	Canola	endoplasmic reticulum, vacuole	44.38	13.81
CDX78455	Canola	cytosol	74.16	13.36
VIT_04s0008g01140.t01	Wine grape	cytosol, nucleus, peroxisome	44.94	13.18
CDY23227	Canola	vacuole	42.7	12.84
CDX84575	Canola	vacuole	42.13	12.71
CDY43744	Canola	vacuole	42.13	12.67
CDX79661	Canola	vacuole	41.57	12.54
KRH15559	Soybean	cytosol	24.72	12.46
CDY03264	Canola	cytosol, golgi, vacuole	37.64	11.06
CDY03265	Canola	vacuole	38.2	10.78
CDY39804	Canola	vacuole	38.2	10.78
CDY39805	Canola	cytosol, golgi, plastid, vacuole	35.96	10.56
CDY31826	Canola	vacuole	38.76	10.55
CDX98080	Canola	cytosol, peroxisome, vacuole	38.76	10.42
CDY26548	Canola	vacuole	38.76	10.41
CDY46906	Canola	vacuole	38.2	10.4
CDY30056	Canola	vacuole	38.2	10.32
CDY15984	Canola	vacuole	38.2	10.0
KRH15564	Soybean	mitochondrion	9.55	7.69
CDX70432	Canola	cytosol	7.87	4.62
CDX70433	Canola	cytosol	8.99	2.93

Protein Annotations

KEGG:00052+3.2.1.26	KEGG:00500+3.2.1.26	Gene3D:2.115.10.20	MapMan:50.3.2	GO:A0A078C0G9	EnsemblPlants:CDX70431
ProteinID:CDX70431	ProteinID:CDX70431.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00140242001	InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_AS
InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf	InterPro:IPR023296	PFAM:PF00251	ScanProsite:PS00609	PANTHER:PTHR31953
PANTHER:PTHR31953:SF14	SMART:SM00640	SUPFAM:SSF75005	UniParc:UPI0004EDC307	:	:

Description

BnaC03g05150D

Coordinates

chrLK031791:+:385339..386109

Molecular Weight (calculated)

20816.5 Da

IEP (calculated)

6.239

GRAVY (calculated)

-0.659

Length

178 amino acids

Sequence
(BLAST)

001: MAEDGNVENL PVQNQVLNRT SFHFQPQRNW LNDPNAPMYY KGFYHLFYQH NPLSPVFSRR IIWGHSVSQD MVNWINDINS CWSGSATILP DGKPVILYTG
101: IDNQERREDR RQVTVLAVPK DASDPLLREW ESQSKTLSWI HQRTYFITVS VTLQPHGKVK MGDGEFSQEL RREILEEE

Best Arabidopsis Sequence Match ( AT5G11920.1 )
(BLAST)

001: MADVMEQNLL QTAVLNRTSF HFQPQRNWLN DPNAPMYYKG FYHLFYQNNP LAPEFSRTRI IWGHSVSQDM VNWIQLEPAL VPSESFDINS CWSGSATILP
101: DGRPVILYTG LDVNNKQQVT VVAEPKDVSD PLLREWVKPK YNPVMVPPSN VPFNCFRDPT EAWKGQDGKW RVLIGAKEKD TEKGMAILYR SDDFVQWTKY
201: PVPLLESEGT GMWECPDFFP VSITGKEGVD TSVNNASVRH VLKASFGGND CYVIGKYSSE TEDFSADYEF TNTSADLRYD HGTFYASKAF FDSVKNRRIN
301: WGWVIETDSK EDDFKKGWAG LMTLPREIWM DTSGKKLMQW PIEEINNLRT KSVSLDDCYE FKTGSTFEIS GITAAQADVE VTFNLPFLEN NPEILDADQV
401: DDATLFDRDS SVGCVYGPFG LLALASSDLS EQTAIFFKVI RRGNGYAVVM CSSEKRSSLR DNIKKSSHGA FLDIDPRHEK ISLRCLIDHS IIESYGVGGK
501: TVITSRVYPK LAIGEAAKLY VFNDGENGVI MTSLEAWSMR NAQINSNPTY

Arabidopsis Description

CWINV6Beta-fructofuranosidase, insoluble isoenzyme CWINV6 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4S6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.