CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51739	Canola	vacuole	99.32	99.15
Bra021508.1-P	Field mustard	vacuole	98.12	98.96
CDX97519	Canola	vacuole	94.69	94.69
AT3G13790.1	Thale cress	vacuole	94.01	94.01
CDY23644	Canola	vacuole	91.27	88.1
CDY23643	Canola	vacuole	63.36	69.81
CDX97518	Canola	endoplasmic reticulum, vacuole	68.32	69.76
CDY24053	Canola	vacuole	65.75	66.32
CDY33067	Canola	vacuole	65.75	66.32
VIT_09s0002g02320.t01	Wine grape	vacuole	63.87	65.21
KRH44130	Soybean	vacuole	61.99	64.18
KRH47104	Soybean	nucleus	61.13	63.3
KRH10019	Soybean	nucleus, vacuole	61.64	62.61
KRH23303	Soybean	nucleus	61.3	62.37
KRH44129	Soybean	vacuole	52.74	59.92
PGSC0003DMT400083254	Potato	nucleus, peroxisome, vacuole	50.17	57.79
Solyc06g064620.2.1	Tomato	mitochondrion	51.71	53.93
PGSC0003DMT400006639	Potato	vacuole	52.4	53.59
CDX95352	Canola	vacuole	41.61	53.17
Solyc03g121680.1.1	Tomato	vacuole	51.71	52.89
CDY23227	Canola	vacuole	52.05	51.35
CDY43744	Canola	vacuole	51.03	50.34
CDX79661	Canola	vacuole	50.17	49.66
CDX84575	Canola	vacuole	50.17	49.66
CDX69719	Canola	mitochondrion, peroxisome, plastid, vacuole	45.89	49.26
CDX97155	Canola	peroxisome, plastid, vacuole	45.03	48.26
CDX70431	Canola	cytosol	14.38	47.19
CDX70432	Canola	cytosol	21.06	40.59
CDY39804	Canola	vacuole	42.47	39.3
CDY46906	Canola	vacuole	43.84	39.14
CDY31826	Canola	vacuole	43.84	39.14
CDY03265	Canola	vacuole	42.12	38.99
CDY30056	Canola	vacuole	42.98	38.09
CDX98080	Canola	cytosol, peroxisome, vacuole	43.15	38.07
CDY26548	Canola	vacuole	42.12	37.1
CDY03264	Canola	cytosol, golgi, vacuole	38.36	36.96
CDY39805	Canola	cytosol, golgi, plastid, vacuole	38.01	36.63
CDY15984	Canola	vacuole	42.12	36.18
CDX78455	Canola	cytosol	46.4	27.43
CDX70433	Canola	cytosol	8.73	9.34

Protein Annotations

Gene3D:2.115.10.20	Gene3D:2.60.120.560	MapMan:3.1.4.1.1	GO:A0A078HI09	UniProt:A0A078HI09	EnsemblPlants:CDY37487
ProteinID:CDY37487	ProteinID:CDY37487.1	InterPro:ConA-like_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	EnsemblPlantsGene:GSBRNA2T00064086001
InterPro:Glyco_hydro_32	InterPro:Glyco_hydro_32_C	InterPro:Glyco_hydro_32_N	InterPro:Glyco_hydro_beta-prop_sf	InterPro:IPR023296	PFAM:PF00251
PFAM:PF08244	PANTHER:PTHR31953	PANTHER:PTHR31953:SF16	SMART:SM00640	SUPFAM:SSF49899	SUPFAM:SSF75005
SignalP:SignalP-noTM	UniParc:UPI0004EEFF5E	:	:	:	:

Description

BnaC01g37450DBnaC01g37450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HI09]

Coordinates

chrLK032401:-:212199..215252

Molecular Weight (calculated)

66295.7 Da

IEP (calculated)

8.910

GRAVY (calculated)

-0.455

Length

584 amino acids

Sequence
(BLAST)

001: MTKEVCSNIG LWLLFTLLLS NYVVDLEASH HVYNRLTQSS NIKSPSVNQP YRTGFHFQPP KNWMNADPNG PMIYKGIYHL FYQWNPKGAV WGNIVWAHST
101: STDLINWDPH PPAIFPSEPF DINGCWSGSA TILPDGKPVI LYTGIDPKNQ QVQNIAEPKD LSDPYLVEWK KSPLNPLMAP DAVNGINASS FRDPTTAWLG
201: HDKKWRVIIG SKIHRRGLAI TYTSKDFLKW EKSPEPLHYD DGSGMWECPD FFPVTRFGSK GVETSSFGEP NEVLKHVLKI SLDDTKHDYY TIGTYDQVGD
301: KFVPDKGFKM DGTAPRYDYG KYYASKTFYD SAKNRRVLWG WTNESSSVED DVEKGWSGIQ TIPRKIWLDR SGKQLIQWPV RELERLRMKQ VNLRNKVLNS
401: RSRLEVYGVT AAQADVEVLF KVRNLEKADV IEPSWTDPQL ICSKMNVSVK SGLGPFGLMV LASKNLEEYT SVYFRIFKAR QNSNKYVVVM CSDQSRSSLE
501: EDNDKTTYGA FVDINPRQPL SLRALIDHSV VESFGGRGRA CITSRVYPKL AMGKNSHLFA FNYGSQSVDV LSLSAWSMKS AQIS

Best Arabidopsis Sequence Match ( AT3G13790.1 )
(BLAST)

001: MTKEVCSNIG LWLLLTLLIG NYVVNLEASH HVYKRLTQST NTKSPSVNQP YRTGFHFQPP KNWMNDPNGP MIYKGIYHLF YQWNPKGAVW GNIVWAHSTS
101: TDLINWDPHP PAIFPSAPFD INGCWSGSAT ILPNGKPVIL YTGIDPKNQQ VQNIAEPKNL SDPYLREWKK SPLNPLMAPD AVNGINASSF RDPTTAWLGQ
201: DKKWRVIIGS KIHRRGLAIT YTSKDFLKWE KSPEPLHYDD GSGMWECPDF FPVTRFGSNG VETSSFGEPN EILKHVLKIS LDDTKHDYYT IGTYDRVKDK
301: FVPDNGFKMD GTAPRYDYGK YYASKTFFDS AKNRRILWGW TNESSSVEDD VEKGWSGIQT IPRKIWLDRS GKQLIQWPVR EVERLRTKQV KNLRNKVLKS
401: GSRLEVYGVT AAQADVEVLF KVRDLEKADV IEPSWTDPQL ICSKMNVSVK SGLGPFGLMV LASKNLEEYT SVYFRIFKAR QNSNKYVVLM CSDQSRSSLK
501: EDNDKTTYGA FVDINPHQPL SLRALIDHSV VESFGGKGRA CITSRVYPKL AIGKSSHLFA FNYGYQSVDV LNLNAWSMNS AQIS

Arabidopsis Description

CWINV1Beta-fructofuranosidase, insoluble isoenzyme CWINV1 [Source:UniProtKB/Swiss-Prot;Acc:Q43866]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.